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一种用于阿尔茨海默病识别与预测的新型级联机器学习管道。

A novel cascade machine learning pipeline for Alzheimer's disease identification and prediction.

作者信息

Zhou Kun, Piao Sirong, Liu Xiao, Luo Xiao, Chen Hongyi, Xiang Rui, Geng Daoying

机构信息

Academy for Engineering and Technology, Fudan University, Shanghai, China.

Department of Radiology, Huashan Hospital, Fudan University, Shanghai, China.

出版信息

Front Aging Neurosci. 2023 Jan 16;14:1073909. doi: 10.3389/fnagi.2022.1073909. eCollection 2022.

Abstract

INTRODUCTION

Alzheimer's disease (AD) is a progressive and irreversible brain degenerative disorder early. Among all diagnostic strategies, hippocampal atrophy is considered a promising diagnostic method. In order to proactively detect patients with early Alzheimer's disease, we built an Alzheimer's segmentation and classification (AL-SCF) pipeline based on machine learning.

METHODS

In our study, we collected coronal T1 weighted images that include 187 patients with AD and 230 normal controls (NCs). Our pipeline began with the segmentation of the hippocampus by using a modified U2-net. Subsequently, we extracted 851 radiomics features and selected 37 features most relevant to AD by the Hierarchical clustering method and Least Absolute Shrinkage and Selection Operator (LASSO) algorithm. At last, four classifiers were implemented to distinguish AD from NCs, and the performance of the models was evaluated by accuracy, specificity, sensitivity, and area under the curve.

RESULTS

Our proposed pipeline showed excellent discriminative performance of classification with AD vs NC in the training set (AUC=0.97, 95% CI: (0.96-0.98)). The model was also verified in the validation set with Dice=0.93 for segmentation and accuracy=0.95 for classification.

DISCUSSION

The AL-SCF pipeline can automate the process from segmentation to classification, which may assist doctors with AD diagnosis and develop individualized medical plans for AD in clinical practice.

摘要

引言

阿尔茨海默病(AD)是一种早期进行性且不可逆的脑退行性疾病。在所有诊断策略中,海马萎缩被认为是一种有前景的诊断方法。为了主动检测早期阿尔茨海默病患者,我们基于机器学习构建了一个阿尔茨海默病分割与分类(AL-SCF)流程。

方法

在我们的研究中,我们收集了冠状位T1加权图像,其中包括187例AD患者和230例正常对照(NC)。我们的流程首先使用改进的U2-net对海马进行分割。随后,我们提取了851个放射组学特征,并通过层次聚类方法和最小绝对收缩与选择算子(LASSO)算法选择了37个与AD最相关的特征。最后,实施了四个分类器以区分AD和NC,并通过准确性、特异性、敏感性和曲线下面积评估模型的性能。

结果

我们提出的流程在训练集中显示出AD与NC分类的出色判别性能(AUC = 0.97,95% CI:(0.96 - 0.98))。该模型在验证集中也得到了验证,分割的Dice值为0.93,分类的准确率为0.95。

讨论

AL-SCF流程可以实现从分割到分类的自动化过程,这可能有助于医生进行AD诊断,并在临床实践中为AD制定个性化医疗计划。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe0/9884698/8f49582b8e95/fnagi-14-1073909-g001.jpg

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