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新种,一种从珠穆朗玛峰分离出的产蓝色色素的物种。

sp. nov., a blue pigment-producing species isolated from Mount Everest.

作者信息

Yu Xue, Zhang Wei, Zhang Gaosen, Wu Yujie, Wu Shiyu, Tian Mao, Ding Wei, Bahadur Ali, Chen Tuo, Liu Guangxiu

机构信息

Key Laboratory of Desert and Desertification, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, Gansu province, PR China.

Key Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, Gansu Province, PR China.

出版信息

Int J Syst Evol Microbiol. 2022 Dec;72(12). doi: 10.1099/ijsem.0.005624.

Abstract

Bacteria in the genus have been found in extreme environments, e.g. glaciers, brine and mural paintings. Here, we report the discovery of a novel pink-coloured bacterium, strain QL17, capable of producing an extracellular water-soluble blue pigment. The bacterium was isolated from the soil of the East Rongbuk Glacier of Mt. Everest, China. 16S rRNA gene sequence analysis showed that strain QL17 was most closely related to the species KR32 . However, compared to KR32 and the next closest relatives, the new species demonstrates considerable phylogenetic distance at the whole-genome level, with an average nucleotide identity of <85 % and inferred DNA-DNA hybridization of <30 %. Polyphasic taxonomy results support our conclusion that strain QL17 represents a novel species of the genus . Strain QL17 had the highest tolerance to hydrogen peroxide at 400 mM. Whole-genome sequencing of strain QL17 revealed the presence of numerous cold-adaptation, antioxidation and UV resistance-associated genes, which are related to adaptation to the extreme environment of Mt. Everest. Results of this study characterized a novel psychrotolerant species, for which the name sp. nov. is proposed. The type strain is QL17 (GDMCC 1.2948=JCM 35246).

摘要

属中的细菌已在极端环境中被发现,例如冰川、盐水和壁画。在此,我们报告发现了一种新型粉红色细菌,菌株QL17,它能够产生一种细胞外水溶性蓝色色素。该细菌是从中国珠穆朗玛峰东绒布冰川的土壤中分离出来的。16S rRNA基因序列分析表明,菌株QL17与物种KR32关系最为密切。然而,与KR32及其最接近的亲缘种相比,这个新物种在全基因组水平上显示出相当大的系统发育距离,平均核苷酸同一性<85%,推测的DNA-DNA杂交率<30%。多相分类学结果支持我们的结论,即菌株QL17代表属的一个新物种。菌株QL17对400 mM过氧化氢具有最高耐受性。菌株QL17的全基因组测序揭示了存在许多与冷适应、抗氧化和抗紫外线相关的基因,这些基因与适应珠穆朗玛峰的极端环境有关。本研究结果鉴定了一个新的耐冷物种,并提议将其命名为sp. nov.。模式菌株为QL17(GDMCC 1.2948 = JCM 35246)。

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