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新种,从台州潮间带海水中分离得到。

sp. nov., isolated from intertidal seawater in Taizhou.

作者信息

Zhang Yu, Hua Jia, Ying Jun-Jie, Dong Han, Li Hao, Xamxidin Maripat, Han Bing-Nan, Sun Cong, Xu Lin

机构信息

College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China.

Zhejiang Sci-Tech University Shaoxing Academy of Biomedicine Co., Ltd, Shaoxing 312369, People's Republic of China.

出版信息

Int J Syst Evol Microbiol. 2022 Dec;72(12). doi: 10.1099/ijsem.0.005616.

Abstract

A Gram-stain-negative, aerobic, chemoheterotrophic and rod-shaped strain, designated as C5, was isolated from intertidal surface seawater in Taizhou, Zhejiang Province, PR China and characterized using a polyphasic taxonomic approach. Strain C5 could produce carotenoids and bacteriochlorophyll . Growth was observed at 20-45 °C, at pH 6.0-9.0 and with 0-8.0 % (w/v) NaCl. The 16S rRNA gene sequence identity analysis revealed that strain C5 was the most closely related to CGMCC 1.7715 (98.8%) and DSM 8509 (98.7%). The phylogenetic reconstruction based on core genes demonstrated that strain C5 was clustered into the members of the genus . The average nucleotide identity and digital DNA-DNA hybridization values between strain C5 and type strains were lower than 76 and 25 %, respectively. The predominant and minor respiratory quinones were identified as ubiquinone-10 and ubiquinone-9. The major fatty acids were summed feature 8 (C 7 and/or C 6) and iso-C. Polar lipids included phosphatidylethanolamine, phosphatidylglycerol, a glycosphingolipid and an unidentified aminolipid. Based on the genetic, chemotaxonomic and phenotypic data, strain C5 is concluded to represent a novel species in the genus , for which the name sp. nov. is proposed. The type strain is C5 (=MCCC 1K05108=KCTC 92307).

摘要

从中国浙江省台州市潮间带表层海水中分离出一株革兰氏染色阴性、需氧、化能异养的杆状菌株,命名为C5,并采用多相分类方法对其进行了表征。菌株C5能产生类胡萝卜素和细菌叶绿素。在20-45 °C、pH 6.0-9.0和0-8.0 %(w/v)NaCl条件下可观察到生长。16S rRNA基因序列同一性分析表明,菌株C5与CGMCC 1.7715(98.8%)和DSM 8509(98.7%)关系最为密切。基于核心基因的系统发育重建表明,菌株C5聚类到该属成员中。菌株C5与模式菌株之间的平均核苷酸同一性和数字DNA-DNA杂交值分别低于76%和25 %。主要和次要呼吸醌分别鉴定为泛醌-10和泛醌-9。主要脂肪酸为总和特征8(C 7和/或C 6)和异-C。极性脂质包括磷脂酰乙醇胺、磷脂酰甘油、一种糖鞘脂和一种未鉴定的氨基脂质。基于遗传、化学分类和表型数据,得出菌株C5代表该属中的一个新物种的结论,为此提出新物种名称sp. nov.。模式菌株为C5(=MCCC 1K05108=KCTC 92307)。

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