Wei Zhonghua, Huang Xuyan, Shi Aimin
The Key Laboratory of Southwest China Wildlife Resources Conservation of the Ministry of Education, College of Life Sciences, China West Normal University, 637009, Nanchong, Sichuan Province, China China West Normal University Nanchong China.
Zookeys. 2023 Jan 13;1139:165-182. doi: 10.3897/zookeys.1139.96216. eCollection 2023.
Complete mitochondrial genomes of three species of the family Buprestidae were sequenced, annotated, and analyzed in this study. To explore the mitogenome features of the subfamily Julodinae and verify its phylogenetic position, the complete mitogenome of was sequenced and annotated. The complete mitogenomes of and were also provided for the phylogenetic analyses within Buprestidae. Compared to the known mitogenomes of Buprestidae species varied from 15,499 bp to 16,771 bp in length, three newly sequenced mitogenomes were medium length (15,759-16,227 bp). These mitogenomes were encoded 37 typical mitochondrial genes. Among the three studied mitogenomes, Leu2 (L2), Ser2 (S2), and Pro (P) were the three most frequently encoded amino acids. Within the Buprestidae, the heterogeneity in sequence divergences of Agrilinae was highest, whereas the sequence homogeneity of Chrysochroinae was highest. Moreover, phylogenetic analyses were performed based on nucleotide matrix (13 PCGs + 2 rRNAs) among the available sequenced species of Buprestidae using Bayesian Inference and Maximum Likelihood methods. The results showed that the Julodinae was closely related to the subfamily Polycestinae. Meanwhile, the genera , , and were included in Buprestinae, which was inconsistent with the current classification system of Buprestidae. These results could contribute to further studies on genetic diversity and phylogeny of Buprestidae.
本研究对吉丁虫科三种昆虫的线粒体全基因组进行了测序、注释和分析。为探究吉丁亚科的线粒体基因组特征并验证其系统发育位置,对[具体物种]的线粒体全基因组进行了测序和注释。同时还提供了[另外两种物种]的线粒体全基因组用于吉丁虫科内部的系统发育分析。与已知的吉丁虫科物种线粒体基因组长度在15,499 bp至16,771 bp之间不同,新测序的三个线粒体基因组长度中等(15,759 - 16,227 bp)。这些线粒体基因组编码37个典型的线粒体基因。在所研究的三个线粒体基因组中,亮氨酸2(L2)、丝氨酸2(S2)和脯氨酸(P)是编码频率最高的三种氨基酸。在吉丁虫科中,丽金龟亚科的序列分歧异质性最高,而金吉丁亚科的序列同质性最高。此外,使用贝叶斯推断和最大似然法,基于吉丁虫科已测序物种的核苷酸矩阵(13个蛋白质编码基因 + 2个核糖体RNA)进行了系统发育分析。结果表明,吉丁亚科与多节吉丁亚科关系密切。同时,[具体属名1]、[具体属名2]和[具体属名3]属被归入吉丁亚科,这与当前的吉丁虫科分类系统不一致。这些结果有助于进一步研究吉丁虫科的遗传多样性和系统发育。