Hosseini Seyyed Ali, Hosseini Elahe, Hajianfar Ghasem, Shiri Isaac, Servaes Stijn, Rosa-Neto Pedro, Godoy Laiz, Nasrallah MacLean P, O'Rourke Donald M, Mohan Suyash, Chawla Sanjeev
Translational Neuroimaging Laboratory, The McGill University Research Centre for Studies in Aging, Douglas Hospital, McGill University, Montréal, QC H4H 1R3, Canada.
Department of Neurology and Neurosurgery, Faculty of Medicine, McGill University, Montréal, QC H3A 2B4, Canada.
Cancers (Basel). 2023 Feb 2;15(3):951. doi: 10.3390/cancers15030951.
This study aimed to investigate the potential of quantitative radiomic data extracted from conventional MR images in discriminating IDH-mutant grade 4 astrocytomas from IDH-wild-type glioblastomas (GBMs). A cohort of 57 treatment-naïve patients with IDH-mutant grade 4 astrocytomas ( = 23) and IDH-wild-type GBMs ( = 34) underwent anatomical imaging on a 3T MR system with standard parameters. Post-contrast T1-weighted and T2-FLAIR images were co-registered. A semi-automatic segmentation approach was used to generate regions of interest (ROIs) from different tissue components of neoplasms. A total of 1050 radiomic features were extracted from each image. The data were split randomly into training and testing sets. A deep learning-based data augmentation method (CTGAN) was implemented to synthesize 200 datasets from the training sets. A total of 18 classifiers were used to distinguish two genotypes of grade 4 astrocytomas. From generated data using 80% training set, the best discriminatory power was obtained from core tumor regions overlaid on post-contrast T1 using the K-best feature selection algorithm and a Gaussian naïve Bayes classifier (AUC = 0.93, accuracy = 0.92, sensitivity = 1, specificity = 0.86, PR_AUC = 0.92). Similarly, high diagnostic performances were obtained from original and generated data using 50% and 30% training sets. Our findings suggest that conventional MR imaging-based radiomic features combined with machine/deep learning methods may be valuable in discriminating IDH-mutant grade 4 astrocytomas from IDH-wild-type GBMs.
本研究旨在探讨从传统磁共振成像(MR)图像中提取的定量影像组学数据在鉴别异柠檬酸脱氢酶(IDH)突变的4级星形细胞瘤与IDH野生型胶质母细胞瘤(GBM)方面的潜力。对57例未经治疗的IDH突变4级星形细胞瘤患者(n = 23)和IDH野生型GBM患者(n = 34)进行了3T MR系统的解剖成像,采用标准参数。对比增强T1加权图像和T2液体衰减反转恢复(FLAIR)图像进行了配准。采用半自动分割方法从肿瘤的不同组织成分中生成感兴趣区域(ROI)。从每张图像中提取了总共1050个影像组学特征。数据被随机分为训练集和测试集。实施了基于深度学习的数据增强方法(CTGAN),从训练集中合成了200个数据集。总共使用了18种分类器来区分4级星形细胞瘤的两种基因型。从使用80%训练集生成的数据中,使用K最优特征选择算法和高斯朴素贝叶斯分类器,在对比增强T1加权图像上叠加的肿瘤核心区域获得了最佳鉴别能力(曲线下面积[AUC]=0.93,准确率=0.92,灵敏度=1,特异度=0.86,阳性预测值曲线下面积[PR_AUC]=0.92)。同样,使用50%和30%训练集的原始数据和生成数据也获得了较高的诊断性能。我们的研究结果表明,基于传统MR成像的影像组学特征结合机器/深度学习方法在鉴别IDH突变的4级星形细胞瘤与IDH野生型GBM方面可能具有价值。