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从(一种微生物)中定位吡喃糖 2-氧化酶:更深入阐明其生物学作用的一步。

Localization of Pyranose 2-Oxidase from : A Step Closer to Elucidate a Biological Role.

机构信息

Food Biotechnology Laboratory, Department of Food Science and Technology, BOKU-University of Natural Resources and Life Sciences, Muthgasse 11, 1190 Vienna, Austria.

Doctoral Programme BioToP-Biomolecular Technology of Proteins, BOKU-University of Natural Resources and Life Sciences, Muthgasse 11, 1190 Vienna, Austria.

出版信息

Int J Mol Sci. 2023 Jan 19;24(3):1975. doi: 10.3390/ijms24031975.

Abstract

Lignin degradation in fungal systems is well characterized. Recently, a potential for lignin depolymerization and modification employing similar enzymatic activities by bacteria is increasingly recognized. The presence of genes annotated as peroxidases in Actinobacteria genomes suggests that these bacteria should contain auxiliary enzymes such as flavin-dependent carbohydrate oxidoreductases. The only auxiliary activity subfamily with significantly similar representatives in bacteria is pyranose oxidase (POx). A biological role of providing HO for peroxidase activation and reduction of radical degradation products suggests an extracellular localization, which has not been established. Analysis of the genomic locus of POX from (POx), which is similar to fungal POx, revealed a start codon upstream of the originally annotated one, and the additional sequence was considered a putative Tat-signal peptide by computational analysis. We expressed POx including this additional upstream sequence as well as fusion constructs consisting of the additional sequence, the POx mature domain and the fluorescent protein mRFP1 in . The putative signal peptide facilitated secretion of KaPOx and the fusion protein, suggesting a natural extracellular localization and supporting a potential role in providing HO and reducing radical compounds derived from lignin degradation.

摘要

真菌系统中的木质素降解得到了很好的描述。最近,人们越来越认识到细菌可能利用类似的酶活性进行木质素解聚和修饰。放线菌基因组中注释为过氧化物酶的基因表明,这些细菌应该含有黄素依赖的碳水化合物氧化还原酶等辅助酶。在细菌中,仅有一个辅助活性亚家族具有与过氧化物酶显著相似的代表性,即吡喃糖氧化酶(POx)。为过氧化物酶的激活提供 HO 并还原自由基降解产物的生物作用表明其具有细胞外定位,但尚未得到证实。对 (POx)的 POx 基因组基因座的分析表明,在最初注释的起始密码子上游存在一个起始密码子,通过计算分析,该额外序列被认为是一个推定的 Tat 信号肽。我们在 中表达了包括这个额外上游序列的 POx 以及由额外序列、POx 成熟结构域和荧光蛋白 mRFP1 组成的融合构建体。推定的信号肽促进了 KaPOx 和融合蛋白的分泌,这表明其具有天然的细胞外定位,并支持其在提供 HO 和还原木质素降解产生的自由基化合物方面的潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58a3/9916811/fb08fe5212fa/ijms-24-01975-g001.jpg

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