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利用机器学习势和路径积分分子动力学研究沸石质子跳跃动力学中的核量子效应。

Nuclear quantum effects on zeolite proton hopping kinetics explored with machine learning potentials and path integral molecular dynamics.

机构信息

Center for Molecular Modeling, Ghent University, Technologiepark 46, 9052, Zwijnaarde, Belgium.

出版信息

Nat Commun. 2023 Feb 23;14(1):1008. doi: 10.1038/s41467-023-36666-y.

Abstract

Proton hopping is a key reactive process within zeolite catalysis. However, the accurate determination of its kinetics poses major challenges both for theoreticians and experimentalists. Nuclear quantum effects (NQEs) are known to influence the structure and dynamics of protons, but their rigorous inclusion through the path integral molecular dynamics (PIMD) formalism was so far beyond reach for zeolite catalyzed processes due to the excessive computational cost of evaluating all forces and energies at the Density Functional Theory (DFT) level. Herein, we overcome this limitation by training first a reactive machine learning potential (MLP) that can reproduce with high fidelity the DFT potential energy surface of proton hopping around the first Al coordination sphere in the H-CHA zeolite. The MLP offers an immense computational speedup, enabling us to derive accurate reaction kinetics beyond standard transition state theory for the proton hopping reaction. Overall, more than 0.6 μs of simulation time was needed, which is far beyond reach of any standard DFT approach. NQEs are found to significantly impact the proton hopping kinetics up to ~473 K. Moreover, PIMD simulations with deuterium can be performed without any additional training to compute kinetic isotope effects over a broad range of temperatures.

摘要

质子跳跃是沸石催化中的关键反应过程。然而,其动力学的准确确定对理论家和实验家都构成了重大挑战。已知核量子效应(NQEs)会影响质子的结构和动力学,但由于在密度泛函理论(DFT)水平上评估所有力和能量的计算成本过高,通过路径积分分子动力学(PIMD)形式严格包含 NQEs 迄今为止对于沸石催化过程来说是遥不可及的。在此,我们通过首先训练一个反应性机器学习势能(MLP)来克服这一限制,该 MLP 可以高度逼真地再现 H-CHA 沸石中第一个 Al 配位球周围质子跳跃的 DFT 势能面。MLP 提供了巨大的计算加速,使我们能够推导出质子跳跃反应的准确反应动力学,超越标准过渡态理论。总的来说,需要超过 0.6 μs 的模拟时间,这远远超出了任何标准 DFT 方法的范围。NQEs 被发现显著影响质子跳跃动力学,最高可达约 473 K。此外,可以进行没有任何额外训练的氘的 PIMD 模拟,以在广泛的温度范围内计算动力学同位素效应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7528/9950054/bf235ee5dacd/41467_2023_36666_Fig1_HTML.jpg

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