Moa Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
Research Center for Intelligent Computing Platforms, Zhejiang Laboratory, Hangzhou 311121, China.
Int J Mol Sci. 2023 Feb 20;24(4):4189. doi: 10.3390/ijms24044189.
Soybean-seed development is controlled in multiple ways, as in many known regulating genes. Here, we identify a novel gene, (), involved in seed development, by analyzing a T-DNA mutant (). The mutant is a random mutant of the transgenic line, with phenotypes with small and brown seed coats. An analysis of the metabolomics and transcriptome combined with RT-qPCR in the seeds revealed that the brown coat may result from the increased expression of genes, while the down-regulated expression of leads to small seed size. The seed phenotypes and a microscopic observation of the seed-coat integument cells in a CRISPR/Cas9-edited mutant confirmed that the gene conferred small phenotypes of the seeds. As mentioned in an annotation on the Phytozome website, encodes a potential DNA helicase RuvA subunit, and no such genes were previously reported to be involved in seed development. Therefore, we identify a novel gene in a new pathway controlling seed development in soybeans.
大豆种子的发育受到多种方式的调控,就像许多已知的调控基因一样。在这里,我们通过分析 T-DNA 突变体(),鉴定了一个参与种子发育的新基因()。突变体是 转基因系的随机突变体,具有小而棕色种皮的表型。对代谢组学和转录组学的分析以及 RT-qPCR 在 种子中的结果表明,棕色种皮可能是由于 基因的表达增加所致,而 基因的下调表达导致种子变小。种子表型和 CRISPR/Cas9 编辑突变体 中种皮外皮细胞的微观观察证实, 基因赋予了 种子的小表型。如 Phytozome 网站上的注释所述, 编码一种潜在的 DNA 解旋酶 RuvA 亚基,以前没有报道过此类基因参与种子发育。因此,我们在一个新的大豆种子发育调控途径中鉴定了一个新的基因。