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真菌病毒治疗策略在评估真菌宿主适应性中的应用概述

An Overview of Mycoviral Curing Strategies Used in Evaluating Fungal Host Fitness.

机构信息

Atta-ur-Rahman School of Applied Biosciences (ASAB), National University of Sciences and Technology (NUST), H-12, Islamabad, 44000, Pakistan.

Department of Biotechnology, University of Mianwali, Punjab, 42200, Pakistan.

出版信息

Mol Biotechnol. 2023 Oct;65(10):1547-1564. doi: 10.1007/s12033-023-00695-1. Epub 2023 Feb 25.

Abstract

The number of novel mycoviruses is increasing at a high pace due to advancements in sequencing technologies. As a result, an uncountable number of mycoviral sequences are available in public sequence repositories. However, only genomic information is not sufficient to understand the impact of mycoviruses on their host biology. Biological characterization is required to determine the nature of mycoviruses (cryptic, hypervirulent, or hypovirulent) and to search for mycoviruses with biocontrol and therapeutic potential. Currently, no particular selective method is used as the gold standard against these mycoviral infections. Given the importance of curing, we present an overview of procedures used in preparation of isogenic lines, along with their benefits and drawbacks. We concluded that a combination of single-spore isolation and hyphal tipping is the best fit for preparation of isogenic lines. Furthermore, recent bioinformatic approaches should be introduced in the field of mycovirology to predict virus-specific antivirals to get robust results.

摘要

由于测序技术的进步,新的真菌病毒的数量正在高速增长。因此,大量的真菌病毒序列可在公共序列存储库中获得。然而,仅基因组信息不足以了解真菌病毒对其宿主生物学的影响。需要进行生物学表征来确定真菌病毒的性质(潜伏、高毒力或低毒力),并寻找具有生物防治和治疗潜力的真菌病毒。目前,尚无特定的选择性方法被用作针对这些真菌病毒感染的金标准。鉴于治疗的重要性,我们介绍了制备同基因系的程序概述,以及它们的优缺点。我们得出的结论是,单孢子分离和菌丝尖端切割的组合最适合制备同基因系。此外,最近的生物信息学方法应该引入真菌病毒学领域,以预测病毒特异性抗病毒药物,以获得稳健的结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/387c/9963364/7f8d2733fb92/12033_2023_695_Fig1_HTML.jpg

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