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与动脉粥样硬化相关的 、 和 基因可能是银屑病潜在的诊断生物标志物。 你提供的原文中存在一些缺失的内容,比如基因名称部分不完整,以上是按照现有内容尽量完整翻译的结果。

The , and Genes Associated with Atherosclerosis May Be Potential Diagnostic Biomarkers for Psoriasis.

作者信息

Liu Shougang, Liu Fanghua, Zhang Zeqiao, Zhuang Zhe, Yuan Xiuqing, Chen Yongfeng

机构信息

Department of Dermatology, Dermatology Hospital of Southern Medical University, Guangzhou, People's Republic of China.

Department of Dermatology, Guangdong Medical University, Zhanjiang, People's Republic of China.

出版信息

J Inflamm Res. 2023 Feb 27;16:827-843. doi: 10.2147/JIR.S398862. eCollection 2023.

Abstract

PURPOSE

Psoriasis and atherosclerosis are immunometabolic diseases. This study aimed to integrate bioinformatics and updated public resources to find potential biological markers associated with atherosclerosis that can cause psoriasis.

PATIENTS AND METHODS

Microarray datasets were downloaded from the Gene Expression Omnibus (GEO) database. Differentially expressed genes (DEGs) were screened, and functional enrichment analysis was performed. We identified psoriasis and atherosclerosis common immune-related genes (PA-IRGs) by overlapping immune-related genes (IRGs) with genes in the module most associated with psoriasis and atherosclerosis obtained by weighted gene co-expression network analysis (WGCNAs). Receiver operating characteristic (ROC) was conducted to evaluate the predictive ability. The skin expression levels of diagnostic biomarkers were further verified by immunohistochemical staining. CIBERSORT, single-sample gene set enrichment analysis (ssGSEA), and Pearson's correlation analysis were applied to evaluate immune and lipid metabolism relationships in psoriatic tissues. In addition, a lincRNA-miRNA-mRNA network was constructed to find the pathogenesis in which diagnostic markers may be involved.

RESULTS

Four PA-IRGs (SELP, CD93, IL2RG, and VAV1) demonstrated the optimal diagnostic value, with an AUC above 0.8. The immune cell infiltration analysis showed that dendritic resting cells, NK cell activation, neutrophils, macrophages M2, macrophages M0, and B-cell memory were highly abundant in psoriasis. Immune response analysis showed that TNF family members, chemokine receptors, interferons, natural killer cells, and TGF-β family members might be involved in psoriasis. Diagnostic biomarkers are strongly associated with various infiltrating immune cells, immune responses, and lipid metabolism. A lincRNA-miRNA-mRNA regulatory network consisting of 31 lincRNAs and 23 miRNAs was constructed. LINC00662 is involved in modulating four diagnostic biomarkers.

CONCLUSION

This study identified atherosclerosis-related genes SELP, CD93, VAV1, and IL2RG as potential psoriasis diagnostic markers. Provide novel insights into the possible regulatory mechanisms involved in psoriasis.

摘要

目的

银屑病和动脉粥样硬化是免疫代谢性疾病。本研究旨在整合生物信息学和最新的公共资源,以寻找与可引发银屑病的动脉粥样硬化相关的潜在生物标志物。

患者和方法

从基因表达综合数据库(GEO)下载微阵列数据集。筛选差异表达基因(DEG),并进行功能富集分析。通过将免疫相关基因(IRG)与通过加权基因共表达网络分析(WGCNA)获得的与银屑病和动脉粥样硬化最相关模块中的基因进行重叠,我们鉴定出银屑病和动脉粥样硬化共同免疫相关基因(PA-IRG)。进行受试者工作特征(ROC)分析以评估预测能力。通过免疫组织化学染色进一步验证诊断生物标志物的皮肤表达水平。应用CIBERSORT、单样本基因集富集分析(ssGSEA)和Pearson相关性分析来评估银屑病组织中的免疫和脂质代谢关系。此外,构建了一个长链非编码RNA-微小RNA-信使RNA网络,以寻找诊断标志物可能涉及的发病机制。

结果

四个PA-IRG(SELP、CD93、IL2RG和VAV1)显示出最佳诊断价值,曲线下面积(AUC)高于0.8。免疫细胞浸润分析表明,静息树突状细胞、自然杀伤细胞活化、中性粒细胞、M2型巨噬细胞、M0型巨噬细胞和B细胞记忆在银屑病中高度丰富。免疫反应分析表明,肿瘤坏死因子(TNF)家族成员、趋化因子受体、干扰素、自然杀伤细胞和转化生长因子-β(TGF-β)家族成员可能参与银屑病。诊断生物标志物与各种浸润免疫细胞、免疫反应和脂质代谢密切相关。构建了一个由31个长链非编码RNA和23个微小RNA组成的长链非编码RNA-微小RNA-信使RNA调控网络。LINC00662参与调节四个诊断生物标志物。

结论

本研究确定动脉粥样硬化相关基因SELP、CD93、VAV1和IL2RG为潜在的银屑病诊断标志物。为银屑病可能涉及的调控机制提供了新见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/500b/9983575/8d4b3f6423fc/JIR-16-827-g0001.jpg

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