Animal Reproduction Department, INIA, CSIC, Madrid, Spain; IVF Spain Madrid, Madrid, Spain.
Animal Reproduction Department, INIA, CSIC, Madrid, Spain.
Reprod Biomed Online. 2023 May;46(5):783-791. doi: 10.1016/j.rbmo.2023.01.012. Epub 2023 Jan 20.
Is the transcriptome of cumulus cells a good predictor of the embryo's developmental competence?
Cumulus cells were collected from donor oocytes and their transcriptome was analysed by RNA sequencing analysis at >30 × 10 reads in samples grouped according to the developmental potential of their enclosed oocyte: not able to develop to the blastocyst stage (Bl-), able to develop to the blastocyst stage but failing to establish a pregnancy (P-), or able to develop to the blastocyst stage and to establish a clinical pregnancy (P+).
The cumulus cell trancriptome was largely independent of the developmental potential as, using a false dscovery rate-adjusted P-value of <0.05, only 10, 11 and 5 genes were differentially expressed for the comparisons P+ versus P-, P+ versus Bl-, and P- versus Bl-, respectively, out of a total of 17,469 genes expressed. Between the differentially expressed genes, those showing little overlap between samples from different groups were CHAC1, up-regulated in the P- and P+ groups compared with the Bl- group, and CENPE, CD93, PECAM1 and HSPA1B, which showed the opposite expression pattern. Focusing on the pregnancy potential, only EPN3 was consistently downregulated in the P+ compared with the P- and Bl- groups.
The cumulus cell transcriptome is largely unrelated to the establishment of clinical pregnancy following embryo transfer, although the expression level of a subset of genes in cumulus cells may indicate the ability to develop to the blastocyst stage.
卵丘细胞的转录组是否能很好地预测胚胎的发育能力?
从供体卵中收集卵丘细胞,并根据其内含卵的发育潜力对其转录组进行 RNA 测序分析:不能发育到囊胚阶段(Bl-)、能够发育到囊胚阶段但未能着床(P-)、或能够发育到囊胚阶段并建立临床妊娠(P+)。
卵丘细胞的转录组在很大程度上与发育潜力无关,因为在使用假发现率调整的 P 值 <0.05 的情况下,只有 10、11 和 5 个基因在 P+与 P-、P+与 Bl-、P-与 Bl-的比较中差异表达,而总共表达了 17469 个基因。在差异表达的基因中,在来自不同组的样本之间很少重叠的基因是 CHAC1,在 P-和 P+组中与 Bl-组相比上调,以及 CENPE、CD93、PECAM1 和 HSPA1B,它们表现出相反的表达模式。关注妊娠潜力,只有 EPN3 在 P+组中与 P-和 Bl-组相比持续下调。
尽管卵丘细胞中一组基因的表达水平可能表明其发育到囊胚阶段的能力,但卵丘细胞的转录组与胚胎移植后临床妊娠的建立关系不大。