Rossi Andrea, Kontarakis Zacharias
Genome Engineering and Model Development Lab (GEMD), IUF-Leibniz Research Institute for Environmental Medicine, 40225 Düsseldorf, Germany.
Genome Engineering and Measurement Laboratory (GEML), Eidgenössische Technische Hochschule (ETH) Zurich, Zurich, Switzerland.
Phenomics. 2021 Dec 27;2(2):79-87. doi: 10.1007/s43657-021-00030-1. eCollection 2022 Apr.
Understanding the way genes work amongst individuals and across generations to shape form and function is a common theme for many genetic studies. The recent advances in genetics, genome engineering and DNA sequencing reinforced the notion that genes are not the only players that determine a phenotype. Due to physiological or pathological fluctuations in gene expression, even genetically identical cells can behave and manifest different phenotypes under the same conditions. Here, we discuss mechanisms that can influence or even disrupt the axis between genotype and phenotype; the role of modifier genes, the general concept of genetic redundancy, genetic compensation, the recently described transcriptional adaptation, environmental stressors, and phenotypic plasticity. We furthermore highlight the usage of induced pluripotent stem cells (iPSCs), the generation of isogenic lines through genome engineering, and sequencing technologies can help extract new genetic and epigenetic mechanisms from what is hitherto considered 'noise'.
理解基因在个体间以及跨代发挥作用以塑造形态和功能的方式,是许多遗传学研究的共同主题。遗传学、基因组工程和DNA测序领域的最新进展强化了这样一种观念,即基因并非决定表型的唯一因素。由于基因表达的生理或病理波动,即使是基因相同的细胞在相同条件下也可能表现出不同的行为并呈现出不同的表型。在此,我们讨论能够影响甚至扰乱基因型与表型之间关系的机制;修饰基因的作用、基因冗余的一般概念、遗传补偿、最近描述的转录适应性、环境应激源以及表型可塑性。我们还强调了诱导多能干细胞(iPSC)的应用、通过基因组工程生成同基因系,以及测序技术有助于从迄今为止被视为“噪音”的信息中提取新的遗传和表观遗传机制。