Key Laboratory of Cellular Physiology, Department of Physiology, Ministry of Education, Shanxi Medical University, Taiyuan, 030001, Shanxi, People's Republic of China.
J Transl Med. 2023 Mar 22;21(1):212. doi: 10.1186/s12967-023-04058-x.
COVID-19, the current global pandemic caused by SARS-CoV-2 infection, can damage the heart and lead to heart failure (HF) and even cardiac death. The 2',5'-oligoadenylate synthetase (OAS) gene family encode interferon (IFN)-induced antiviral proteins which is associated with the antiviral immune responses of COVID-19. While the potential association of OAS gene family with cardiac injury and failure in COVID-19 has not been determined.
The expression levels and biological functions of OAS gene family in SARS-CoV-2 infected cardiomyocytes dataset (GSE150392) and HF dataset (GSE120852) were determined by comprehensive bioinformatic analysis and experimental validation. The associated microRNAs (miRNAs) were explored from Targetscan and GSE104150. The potential OAS gene family-regulatory chemicals or ingredients were predicted using Comparative Toxicogenomics Database (CTD) and SymMap database.
The OAS genes were highly expressed in both SARS-CoV-2 infected cardiomyocytes and failing hearts. The differentially expressed genes (DEGs) in the two datasets were enriched in both cardiovascular disease and COVID-19 related pathways. The miRNAs-target analysis indicated that 10 miRNAs could increase the expression of OAS genes. A variety of chemicals or ingredients were predicted regulating the expression of OAS gene family especially estradiol.
OAS gene family is an important mediator of HF in COVID-19 and may serve as a potential therapeutic target for cardiac injury and HF in COVID-19.
由 SARS-CoV-2 感染引起的当前全球大流行的 COVID-19 可损害心脏,导致心力衰竭(HF)甚至心脏性死亡。2′,5′-寡聚腺苷酸合成酶(OAS)基因家族编码干扰素(IFN)诱导的抗病毒蛋白,与 COVID-19 的抗病毒免疫反应有关。然而,OAS 基因家族与 COVID-19 中心脏损伤和衰竭的潜在关联尚未确定。
通过综合生物信息学分析和实验验证,确定了 SARS-CoV-2 感染的心肌细胞数据集(GSE150392)和 HF 数据集(GSE120852)中 OAS 基因家族的表达水平和生物学功能。从 Targetscan 和 GSE104150 探索相关的 microRNAs(miRNAs)。使用比较毒理学基因组数据库(CTD)和 SymMap 数据库预测潜在的 OAS 基因家族调节化学物质或成分。
OAS 基因在 SARS-CoV-2 感染的心肌细胞和衰竭的心脏中均高度表达。两个数据集的差异表达基因(DEGs)均富集于心血管疾病和 COVID-19 相关途径。miRNAs 靶分析表明,有 10 个 miRNAs 可以增加 OAS 基因的表达。预测了多种化学物质或成分可调节 OAS 基因家族的表达,特别是雌二醇。
OAS 基因家族是 COVID-19 中 HF 的重要介质,可能成为 COVID-19 中心脏损伤和 HF 的潜在治疗靶点。