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细菌中A到I RNA编辑的发生、特征及适应性:综述

The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review.

作者信息

Liao Weixue, Nie Wenhan, Ahmad Iftikhar, Chen Gongyou, Zhu Bo

机构信息

Shanghai Yangtze River Delta Eco-Environmental Change and Management Observation and Research Station, Shanghai Cooperative Innovation Center for Modern Seed Industry, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.

Department of Environmental Sciences, COMSATS University Islamabad, Vehari Campus, Vehari, Pakistan.

出版信息

Front Microbiol. 2023 Mar 7;14:1143929. doi: 10.3389/fmicb.2023.1143929. eCollection 2023.

Abstract

A-to-I RNA editing is a very important post-transcriptional modification or co-transcriptional modification that creates isoforms and increases the diversity of proteins. In this process, adenosine (A) in RNA molecules is hydrolyzed and deaminated into inosine (I). It is well known that ADAR (adenosine deaminase acting on RNA)-dependent A-to-I mRNA editing is widespread in animals. Next, the discovery of A-to-I mRNA editing was mediated by TadA (tRNA-specific adenosine deaminase) in which is ADAR-independent event. Previously, the editing event S128P on the flagellar structural protein FliC enhanced the bacterial tolerance to oxidative stress in . In addition, the editing events T408A on the enterobactin iron receptor protein XfeA act as switches by controlling the uptake of Fe in response to the concentration of iron in the environment. Even though bacteria have fewer editing events, the great majority of those that are currently preserved have adaptive benefits. Interestingly, it was found that a TadA-independent A-to-I RNA editing event T408A occurred on , indicating that there may be other new enzymes that perform a function like TadA. Here, we review recent advances in the characteristics, functions, and adaptations of editing in bacteria.

摘要

A-to-I RNA编辑是一种非常重要的转录后修饰或共转录修饰,可产生异构体并增加蛋白质的多样性。在这个过程中,RNA分子中的腺苷(A)被水解并脱氨基成为肌苷(I)。众所周知,依赖ADAR(作用于RNA的腺苷脱氨酶)的A-to-I mRNA编辑在动物中广泛存在。接下来,发现A-to-I mRNA编辑是由TadA(tRNA特异性腺苷脱氨酶)介导的,这是一个不依赖ADAR的事件。此前,鞭毛结构蛋白FliC上的编辑事件S128P增强了细菌对氧化应激的耐受性。此外,肠杆菌素铁受体蛋白XfeA上的编辑事件T408A通过根据环境中铁的浓度控制铁的摄取来充当开关。尽管细菌中的编辑事件较少,但目前保留的绝大多数编辑事件都具有适应性益处。有趣的是,发现TadA非依赖的A-to-I RNA编辑事件T408A发生在[此处原文可能缺失具体内容],这表明可能存在其他执行类似TadA功能的新酶。在这里,我们综述了细菌中编辑的特征、功能和适应性方面的最新进展。

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