Suppr超能文献

基于网络的方法通过 RNA 转录组研究冬凌草甲素促进口腔鳞状细胞癌细胞凋亡的机制。

Network-Based Method to Investigate the Promoted Cell Apoptosis Mechanisms of Oridonin in OSCC through the RNA-Transcriptome.

机构信息

School of Clinical Medicine, Guangdong Pharmaceutical University, Guangzhou 510000, China.

Department of Stomatology, The First Affiliated Hospital of Guangdong Pharmaceutical University, Guangzhou 510000, China.

出版信息

J Immunol Res. 2023 Mar 16;2023:5293677. doi: 10.1155/2023/5293677. eCollection 2023.

Abstract

The morbidity of oral cancer is high in the world. Oridonin is a traditional Chinese medicine that can effectively inhibit oral squamous cell carcinoma (OSCC) growth, but its mechanism remains unclear. Our previous data showed that oridonin inhibited CAL-27 cell proliferation and promoted apoptosis. Herein, we explored the mechanism and target of oridonin in human OSCC through RNA sequencing and integration of multiple bioinformatics analysis strategies. Differences in gene expression can be analyzed with RNA sequencing. Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Ontology (GO), gene set enrichment analysis (GSEA), Disease Ontology (DO), and other enrichment analyses were used to evaluate differentially expressed genes (DEGs). Protein-protein interaction (PPI) networks were built via the STRING database. It was found that tumor necrosis factor (TNF) signaling pathway, cytokine-cytokine receptor interaction, and nuclear factor-kappa B (NF-kappaB) signaling pathway were associated with the therapeutic effects of oridonin in OSCC. Three key genes (BIRC3, TNFSF10, and BCL6) were found to associate with cell apoptosis in OSCC cells treated with oridonin. Quantitative PCR assays verified the expression of apoptosis-related DEGs: TNFSF10, BIRC3, AIFM2, BCL6, BCL2L2, and Bax. Western blots were employed for verifying proteins expression associated with DEGs: cleaved caspase 3, Bax, Bcl-w, anti-cIAP2, and anti-TRAIL. In conclusion, our findings reveal the molecular pathways and targets by which oridonin can treat and induce cytotoxic effects in OSCC: by affecting the signaling including TNF, NF-B, and cytokine-cytokine receptor interaction and by regulating the key gene BIRC3, TNFSF10, and BCL6. It should be noted that further clinical trial validation is very necessary. Combined with current research trends, our existing research may provide innovative research drugs for the treatment of OSCC.

摘要

口腔癌的发病率在全球范围内较高。冬凌草甲素是一种中药,能有效抑制口腔鳞状细胞癌(OSCC)的生长,但作用机制尚不清楚。我们之前的数据表明,冬凌草甲素抑制 CAL-27 细胞增殖并促进细胞凋亡。在此,我们通过 RNA 测序和整合多种生物信息学分析策略,探讨了冬凌草甲素在人 OSCC 中的作用机制和靶点。RNA 测序可分析基因表达差异。京都基因与基因组百科全书(KEGG)、基因本体论(GO)、基因集富集分析(GSEA)、疾病本体论(DO)等富集分析用于评估差异表达基因(DEGs)。通过 STRING 数据库构建蛋白质-蛋白质相互作用(PPI)网络。结果发现,肿瘤坏死因子(TNF)信号通路、细胞因子-细胞因子受体相互作用和核因子-κB(NF-κB)信号通路与冬凌草甲素治疗 OSCC 的疗效相关。在冬凌草甲素处理的 OSCC 细胞中,发现三个关键基因(BIRC3、TNFSF10 和 BCL6)与细胞凋亡有关。定量 PCR 检测验证了凋亡相关 DEGs 的表达:TNFSF10、BIRC3、AIFM2、BCL6、BCL2L2 和 Bax。Western blot 用于验证与 DEGs 相关的蛋白表达:裂解的 caspase 3、Bax、Bcl-w、抗 cIAP2 和抗 TRAIL。综上所述,我们的研究结果揭示了冬凌草甲素治疗和诱导 OSCC 细胞毒性作用的分子途径和靶点:通过影响 TNF、NF-B 和细胞因子-细胞因子受体相互作用等信号通路,以及调节关键基因 BIRC3、TNFSF10 和 BCL6。值得注意的是,还需要进一步的临床试验验证。结合当前的研究趋势,我们现有的研究可能为治疗 OSCC 提供创新的研究药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8f3/10036191/00854d7e43e5/JIR2023-5293677.001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验