Northwest Metabolomics Research Center, University of Washington, Seattle, Washington 98109, United States.
Mitochondria and Metabolism Center, Anesthesiology and Pain Medicine, University of Washington, Seattle, Washington 98109, United States.
Anal Chem. 2023 Apr 11;95(14):6029-6037. doi: 10.1021/acs.analchem.3c00054. Epub 2023 Mar 29.
Coenzyme A, acetyl coenzyme A, coenzymes of cellular energy, coenzymes of redox reactions, and antioxidants mediate biochemical reactions fundamental to the functioning of all living cells. There is an immense interest in measuring them routinely in biological specimens to gain insights into their roles in cellular functions and to help characterize the biological status. However, it is challenging to measure them ex vivo as they are sensitive to specimen harvesting, extraction, and measurement conditions. This challenge is largely underappreciated and carries the risk of grossly inaccurate measurements that lead to incorrect inferences. To date, several efforts have been focused on alleviating this challenge using NMR spectroscopy. However, a comprehensive solution for the measurement of the compounds in a wide variety of biological specimens is still lacking. As a part of addressing this challenge, we demonstrate here that the total pool of each group of unstable metabolites offers a starting place for the representation of labile metabolites in biological specimens. Based on this approach, in this proof-of-concept study, we determine the distribution of the labile compounds in different organs including heart, kidney, liver, brain, and skeletal muscle of a mouse model. The results were independently validated using different specimens and a different metabolite extraction protocol. Further, we show that both stable and unstable metabolites were distributed differentially in different organs, which signifies their differential functional roles, the knowledge of which is currently lacking for many metabolites. Intriguingly, the concentration of taurine, an amino sulfonic acid, in skeletal muscle is >30 mM, which is the highest for any metabolite in a mammalian tissue known to date. To the best of our knowledge, this is the first study to profile the whole body distribution of the labile and other high-concentration metabolites using NMR spectroscopy. The results may pave ways for gaining new insights into cellular functions in health and diseases.
辅酶 A、乙酰辅酶 A、细胞能量辅因子、氧化还原反应辅因子和抗氧化剂调节着所有活细胞功能的基本生化反应。人们对在生物标本中常规测量这些物质以深入了解其在细胞功能中的作用并帮助描述生物状态有着极大的兴趣。然而,由于它们对外界环境敏感,包括标本采集、提取和测量条件,因此在体外测量它们具有挑战性。这种挑战在很大程度上未被充分认识,并且存在测量结果严重不准确的风险,这可能导致错误的推断。迄今为止,已经有几项努力集中使用 NMR 光谱法来缓解这一挑战。然而,在广泛的生物标本中测量这些化合物的综合解决方案仍然缺乏。作为应对这一挑战的一部分,我们在此展示了不稳定代谢物的总池为生物标本中不稳定代谢物的表示提供了起点。基于此方法,在这项概念验证研究中,我们确定了不稳定化合物在包括心脏、肾脏、肝脏、大脑和小鼠模型骨骼肌在内的不同器官中的分布。结果使用不同的标本和不同的代谢物提取方案进行了独立验证。此外,我们还表明,稳定和不稳定代谢物在不同的器官中分布不同,这表明它们具有不同的功能作用,而目前对许多代谢物缺乏这方面的了解。有趣的是,在哺乳动物组织中,一种氨基酸磺酸——牛磺酸的浓度>30mM,这是迄今为止已知的所有代谢物中浓度最高的。据我们所知,这是第一项使用 NMR 光谱法对整个身体的不稳定和其他高浓度代谢物进行分布分析的研究。该研究结果可能为深入了解健康和疾病中的细胞功能提供新的见解。