来自土耳其的肠炎沙门氏菌双斯贝耶尔格血清型全基因组序列揭示了其致病潜力。
Whole-Genome Sequence of Salmonella enterica Serovar Bispebjerg from Turkey Reveals Its Pathogenic Potential.
作者信息
Tiengo Alessia, Orsini Massimiliano, Petrin Sara, Losasso Carmen, Longo Alessandra, Cento Giulia, Ciot Laura, Ceruti Raffaella, Cibin Veronica, Barco Lisa
机构信息
Italian National Reference Laboratory for Salmonellosis, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Padua, Italy.
Gesco SCA Laboratory, Cazzago San Martino, Brescia, Italy.
出版信息
Microbiol Resour Announc. 2023 May 17;12(5):e0004323. doi: 10.1128/mra.00043-23. Epub 2023 Apr 6.
Abstract
We report the genome sequence of a Salmonella enterica subsp. serovar Bispebjerg strain that was isolated from a turkey flock in 2011. The genome analysis of the strain, a rare and multihost serovar, revealed its pathogenic potential due to antimicrobial resistance and a plethora of Salmonella pathogenicity islands and virulence factors.
摘要
我们报告了一株肠炎沙门氏菌亚种血清型比斯佩比约格菌株的基因组序列，该菌株于2011年从一群火鸡中分离得到。对该菌株（一种罕见的多宿主血清型）的基因组分析揭示了其因抗菌药物耐药性以及大量沙门氏菌致病岛和毒力因子而具有的致病潜力。
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4
fastp: an ultra-fast all-in-one FASTQ preprocessor.fastp：一个超快速的一体化 FASTQ 预处理程序。
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Nucleic Acids Res. 2019 Jan 8;47(D1):D74-D77. doi: 10.1093/nar/gky1014.
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