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墨西哥一种观赏植物紫薇(千屈菜科)的叶绿体基因组。

The chloroplast genome of Walp. (Lythraceae), a Mexico ornamental plant.

作者信息

Gu Cuihua, Ye Yacheng, Zhang Guozhe, Yu Mengxin, Bai Mingzhu, Ma Qingqing, Shao Weili, Zhao Yu, Hong Sidan

机构信息

College of Landscape and Architecture, Zhejiang A&F University, Hangzhou, China.

Zhejiang Provincial Key Laboratory of Germplasm Innovation and Utilization for Garden Plants, Zhejiang A&F University, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2023 Apr 24;8(4):522-526. doi: 10.1080/23802359.2023.2203783. eCollection 2023.

DOI:10.1080/23802359.2023.2203783
PMID:37124996
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10132219/
Abstract

Walp. is an ornamental plant belonging to the Lythraceae. In this study, we reported the complete chloroplast (cp) genome sequence here and analyzed the phylogenetic relationship among Lythraceae plants. The length of the cp genome was 158,999 bp, including a large single-copy (LSC, 89,311 bp) region and a small single-copy (SSC, 18,436 bp) region separated by a pair of inverted repeats (IRs, 25,626 bp). There were 72 unique protein-coding genes (PCGs), 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes in the cp genome of . A total of 223 simple sequence repeats (SSRs) and 34 long repeat sequences were identified. Phylogenetic analyses using maximum-likelihood (ML) revealed that was close to . In addition, the two species were the sister group of .

摘要

水芫花是一种属于千屈菜科的观赏植物。在本研究中,我们在此报道了完整的叶绿体(cp)基因组序列,并分析了千屈菜科植物之间的系统发育关系。cp基因组长度为158,999 bp,包括一个大单拷贝(LSC,89,311 bp)区域和一个小单拷贝(SSC,18,436 bp)区域,这两个区域被一对反向重复序列(IRs,25,626 bp)隔开。在其cp基因组中有72个独特的蛋白质编码基因(PCGs)、30个转移RNA(tRNA)基因和4个核糖体RNA(rRNA)基因。共鉴定出223个简单序列重复(SSRs)和34个长重复序列。使用最大似然法(ML)进行的系统发育分析表明,[具体物种名称1]与[具体物种名称2]关系密切。此外,这两个[具体物种名称3]物种是[具体物种名称4]的姐妹群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/50bb7628b997/TMDN_A_2203783_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/93f553e258c0/TMDN_A_2203783_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/fa184b3babf3/TMDN_A_2203783_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/50bb7628b997/TMDN_A_2203783_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/93f553e258c0/TMDN_A_2203783_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/fa184b3babf3/TMDN_A_2203783_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c1d0/10132219/50bb7628b997/TMDN_A_2203783_F0003_C.jpg

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1
CPGView: A package for visualizing detailed chloroplast genome structures.CPGView:一个用于可视化详细叶绿体基因组结构的软件包。
Mol Ecol Resour. 2023 Apr;23(3):694-704. doi: 10.1111/1755-0998.13729. Epub 2023 Jan 1.
2
Fifteen complete chloroplast genomes of Trapa species (Trapaceae): insight into genome structure, comparative analysis and phylogenetic relationships.十五个菱属物种(菱科)的完整叶绿体基因组:对基因组结构、比较分析和系统发育关系的深入了解。
BMC Plant Biol. 2022 May 5;22(1):230. doi: 10.1186/s12870-022-03608-7.
3
Chloroplast genome of Roxb. (Trapa, Lythraceae).
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Mitochondrial DNA B Resour. 2021 Feb 5;6(2):333-334. doi: 10.1080/23802359.2020.1866457.
4
Characterization of the chloroplast genome of Wall. ex Kurz. (, Lythraceae).紫茉莉科(Nyctaginaceae)黄细心属(Boerhavia Wall. ex Kurz.)叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2021 Jan 6;6(1):19-20. doi: 10.1080/23802359.2020.1844095.
5
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6
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7
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8
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Molecules. 2018 Apr 8;23(4):846. doi: 10.3390/molecules23040846.
9
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Appl Microbiol Biotechnol. 2018 Apr;102(7):3173-3182. doi: 10.1007/s00253-018-8770-6. Epub 2018 Feb 22.
10
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Brief Bioinform. 2019 Jul 19;20(4):1160-1166. doi: 10.1093/bib/bbx108.