Cancer Research Center, Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu Province, China.
Department of Computer Science and Engineering, Tandon School of Engineering, New York University, Brooklyn, USA.
Sci Rep. 2023 May 5;13(1):7366. doi: 10.1038/s41598-023-34503-2.
Colon cancer (CC) has a poor 5-year survival rate though the treatment techniques and strategies have been improved. Succinylation and long noncoding RNAs (lncRNAs) have prognostic value for CC patients. We analyzed and obtained succinylation-related lncRNA by co-expression in CC. A novel succinylation-related lncRNA model was developed by univariate and Least absolute shrinkage and selection operator (Lasso) regression analysis and we used principal component analysis (PCA), functional enrichment annotation, tumor immune environment, drug sensitivity and nomogram to verify the model, respectively. Six succinylation-related lncRNAs in our model were finally confirmed to distinguish the survival status of CC and showed statistically significant differences in training set, testing set, and entire set. The prognosis of with this model was associated with age, gender, M0 stage, N2 stage, T3 + T4 stage and Stage III + IV. The high-risk group showed a higher mutation rate than the low-risk group. We constructed a model to predict overall survival for 1-, 3-, and 5-year with AUCs of 0.694, 0.729, and 0.802, respectively. The high-risk group was sensitive to Cisplatin and Temozolomide compounds. Our study provided novel insights into the value of the succinylation-related lncRNA signature as a predictor of prognosis, which had high clinical application value in the future.
尽管治疗技术和策略有所提高,但结肠癌(CC)的 5 年生存率仍然较差。琥珀酰化和长链非编码 RNA(lncRNA)对 CC 患者具有预后价值。我们通过 CC 中的共表达分析和获得了琥珀酰化相关的 lncRNA。通过单变量和最小绝对收缩和选择算子(Lasso)回归分析,我们开发了一种新的琥珀酰化相关 lncRNA 模型,并分别使用主成分分析(PCA)、功能富集注释、肿瘤免疫环境、药物敏感性和诺莫图来验证该模型。我们的模型中的六个琥珀酰化相关 lncRNA 最终被证实可以区分 CC 的生存状态,在训练集、测试集和整个集中均显示出统计学上的显著差异。该模型的预后与年龄、性别、M0 期、N2 期、T3+T4 期和 III+IV 期有关。高危组的突变率高于低危组。我们构建了一个模型来预测 1 年、3 年和 5 年的总生存率,AUC 分别为 0.694、0.729 和 0.802。高危组对顺铂和替莫唑胺化合物敏感。我们的研究为琥珀酰化相关 lncRNA 特征作为预后预测指标的价值提供了新的见解,该特征在未来具有很高的临床应用价值。