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LTF通过NF-κB信号通路诱导半月板衰老和退变:一项基于综合生物信息学分析和实验验证的研究

LTF induces senescence and degeneration in the meniscus via the NF-κB signaling pathway: A study based on integrated bioinformatics analysis and experimental validation.

作者信息

Zhang Jun, Zhu Jiayong, Zhao Boming, Nie Daibang, Wang Wang, Qi Yongjian, Chen Liaobin, Li Bin, Chen Biao

机构信息

Division of Joint Surgery and Sports Medicine, Department of Orthopedic Surgery, Zhongnan Hospital of Wuhan University, Wuhan, Hubei, China.

Department of Immunology, College of Basic Medicine, Chongqing Medical University, Chongqing, China.

出版信息

Front Mol Biosci. 2023 Apr 24;10:1134253. doi: 10.3389/fmolb.2023.1134253. eCollection 2023.

DOI:10.3389/fmolb.2023.1134253
PMID:37168259
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10164984/
Abstract

The functional integrity of the meniscus continually decreases with age, leading to meniscal degeneration and gradually developing into osteoarthritis (OA). In this study, we identified diagnostic markers and potential mechanisms of action in aging-related meniscal degeneration through bioinformatics and experimental verification. Based on the GSE98918 dataset, common differentially expressed genes (co-DEGs) were screened using differential expression analysis and the WGCNA algorithm, and enrichment analyses based on Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were further performed. Next, the co-DEGs were imported into the STRING database and Cytoscape to construct a protein‒protein interaction (PPI) network and further validated by three algorithms in cytoHubba, receiver operating characteristic (ROC) curve analysis and the external GSE45233 dataset. Moreover, the diagnostic marker lactotransferrin (LTF) was verified in rat models of senescence and replicative cellular senescence via RT‒qPCR, WB, immunohistochemistry and immunofluorescence, and then the potential molecular mechanism was explored by loss of function and overexpression of LTF. According to the analysis of the GSE98918 dataset, we identified 52 co-DEGs (42 upregulated genes and 10 downregulated genes) in the OA meniscus. LTF, screened out by Cytoscape, ROC curve analysis in the GSE98918 dataset and another external GSE45233 dataset, might have good predictive power in meniscal degeneration. Our experimental results showed that LTF expression was statistically increased in the meniscal tissue of aged rats (24 months) and senescent passage 5th (P5) meniscal cells. In P5 meniscal cells, LTF knockdown inhibited the NF-κB signaling pathway and alleviated senescence. LTF overexpression in passage 0 (P0) meniscal cells increased the expression of senescence-associated secretory phenotype (SASP) and induced senescence by activating the NF-κB signaling pathway. However, the senescence phenomenon caused by LTF overexpression could be reversed by the NF-κB inhibitor pyrrolidine dithiocarbamate (PDTC). For the first time, we found that increased expression of LTF was observed in the aging meniscus and could induce meniscal senescence and degeneration by activating the NF-κB signaling pathway. These results revealed that LTF could be a potential diagnostic marker and therapeutic target for age-related meniscal degeneration.

摘要

半月板的功能完整性会随着年龄的增长而持续下降,导致半月板退变,并逐渐发展为骨关节炎(OA)。在本研究中,我们通过生物信息学和实验验证,确定了与衰老相关的半月板退变中的诊断标志物和潜在作用机制。基于GSE98918数据集,使用差异表达分析和WGCNA算法筛选出常见的差异表达基因(co-DEGs),并进一步基于基因本体论(GO)术语和京都基因与基因组百科全书(KEGG)通路进行富集分析。接下来,将co-DEGs导入STRING数据库和Cytoscape中构建蛋白质-蛋白质相互作用(PPI)网络,并通过cytoHubba中的三种算法、受试者工作特征(ROC)曲线分析和外部GSE45233数据集进行进一步验证。此外,通过RT-qPCR、WB、免疫组织化学和免疫荧光在衰老大鼠模型和复制性细胞衰老模型中验证了诊断标志物乳铁传递蛋白(LTF),然后通过LTF的功能丧失和过表达来探索潜在的分子机制。根据对GSE98918数据集的分析,我们在OA半月板中鉴定出52个co-DEGs(42个上调基因和10个下调基因)。通过Cytoscape、GSE98918数据集中的ROC曲线分析以及另一个外部GSE45233数据集筛选出的LTF,可能在半月板退变中具有良好的预测能力。我们的实验结果表明,LTF在老年大鼠(24个月)的半月板组织和第5代(P5)衰老半月板细胞中的表达在统计学上显著增加。在P5半月板细胞中,LTF敲低抑制了NF-κB信号通路并减轻了衰老。P0代半月板细胞中LTF的过表达增加了衰老相关分泌表型(SASP)的表达,并通过激活NF-κB信号通路诱导衰老。然而,LTF过表达引起的衰老现象可被NF-κB抑制剂吡咯烷二硫代氨基甲酸盐(PDTC)逆转。我们首次发现,在衰老的半月板中观察到LTF表达增加,并且它可以通过激活NF-κB信号通路诱导半月板衰老和退变。这些结果表明,LTF可能是与年龄相关的半月板退变的潜在诊断标志物和治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b775/10164984/4700c922bf37/fmolb-10-1134253-g007.jpg
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