Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, USA.
Department of Biological Systems Engineering, Washington State University, Richland, Washington, USA.
Proteomics. 2023 Jul;23(13-14):e2200194. doi: 10.1002/pmic.202200194. Epub 2023 May 29.
Redox post-translational modifications on cysteine thiols (redox PTMs) have profound effects on protein structure and function, thus enabling regulation of various biological processes. Redox proteomics approaches aim to characterize the landscape of redox PTMs at the systems level. These approaches facilitate studies of condition-specific, dynamic processes implicating redox PTMs and have furthered our understanding of redox signaling and regulation. Mass spectrometry (MS) is a powerful tool for such analyses which has been demonstrated by significant advances in redox proteomics during the last decade. A group of well-established approaches involves the initial blocking of free thiols followed by selective reduction of oxidized PTMs and subsequent enrichment for downstream detection. Alternatively, novel chemoselective probe-based approaches have been developed for various redox PTMs. Direct detection of redox PTMs without any enrichment has also been demonstrated given the sensitivity of contemporary MS instruments. This review discusses the general principles behind different analytical strategies and covers recent advances in redox proteomics. Several applications of redox proteomics are also highlighted to illustrate how large-scale redox proteomics data can lead to novel biological insights.
巯基的氧化还原翻译后修饰(redox PTMs)对蛋白质结构和功能有深远的影响,从而能够调节各种生物过程。氧化还原蛋白质组学方法旨在从系统水平上描述氧化还原 PTM 的图谱。这些方法促进了涉及氧化还原 PTM 的特定条件、动态过程的研究,并进一步加深了我们对氧化还原信号和调节的理解。质谱(MS)是一种强大的分析工具,在过去十年中氧化还原蛋白质组学的显著进展证明了这一点。一组成熟的方法涉及最初阻断游离巯基,然后选择性还原氧化的 PTMs,随后进行下游检测的富集。或者,已经为各种氧化还原 PTM 开发了新的基于化学选择性探针的方法。鉴于现代 MS 仪器的灵敏度,无需任何富集即可直接检测氧化还原 PTMs。本文讨论了不同分析策略背后的一般原则,并介绍了氧化还原蛋白质组学的最新进展。还强调了氧化还原蛋白质组学的几个应用,以说明大规模氧化还原蛋白质组学数据如何导致新的生物学见解。