Frolov Evgenii N, Elcheninov Alexander G, Gololobova Alexandra V, Toshchakov Stepan V, Novikov Andrei A, Lebedinsky Alexander V, Kublanov Ilya V
Federal Research Center of Biotechnology, Winogradsky Institute of Microbiology, Russian Academy of Sciences, Moscow, Russia.
Kurchatov Center for Genome Research, National Research Center "Kurchatov Institute", Moscow, Russia.
Front Microbiol. 2023 May 12;14:1185739. doi: 10.3389/fmicb.2023.1185739. eCollection 2023.
One of the important current issues of bioenergetics is the establishment of the thermodynamic limits of life. There is still no final understanding of what is the minimum value of the energy yield of a reaction that is sufficient to be used by an organism (the so-called "biological quantum of energy"). A reasonable model for determination of the minimal energy yield would be microorganisms capable of living on low-energy substrates, such as acetogenic prokaryotes. The most prominent metabolic feature of acetogens is autotrophic growth with molecular hydrogen and carbon dioxide as the substrates, which is hardly competitive in environments. Most probably, that is why only facultative autotrophic acetogens have been known so far. Here, we describe the first obligately autotrophic acetogenic bacterium gen. nov., sp. nov., strain 3443-3Ac. Phylogenetically, the new genus falls into a monophyletic group of heterotrophic bacteria of the genera , , and (hereinafter referred to as TTC group), where the sole acetogenic representative has so far been the facultatively autotrophic . and both are acetogens employing energy-converting hydrogenase (Ech-acetogens) that are likely to have inherited the acetogenesis capacity vertically from common ancestor. However, their acetogenic machineries have undergone different adjustments by gene replacements due to horizontal gene transfers from different donors. Obligate autotrophy of is associated with the lack of many sugar transport systems and carbohydrate catabolism enzymes that are present in other TTC group representatives, including .
生物能量学当前的重要问题之一是确定生命的热力学极限。对于足以被生物体利用的反应的能量产率最小值(即所谓的“生物能量量子”),目前仍没有最终定论。确定最小能量产率的一个合理模型是能够利用低能量底物生存的微生物,例如产乙酸原核生物。产乙酸菌最显著的代谢特征是以分子氢和二氧化碳为底物进行自养生长,这在环境中几乎没有竞争力。很可能正因如此,到目前为止已知的只有兼性自养产乙酸菌。在此,我们描述了首例专性自养产乙酸细菌,新属,新种,菌株3443 - 3Ac。在系统发育上,这个新属属于、和属的异养细菌单系群(以下简称TTC群),迄今为止该群中唯一的产乙酸代表是兼性自养的。和都是利用能量转换氢化酶的产乙酸菌(Ech - 产乙酸菌),它们很可能从共同祖先垂直继承了产乙酸能力。然而,由于来自不同供体的水平基因转移,它们的产乙酸机制通过基因替换经历了不同的调整。的专性自养与其他TTC群代表(包括)中存在的许多糖转运系统和碳水化合物分解代谢酶的缺失有关。