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‘红地球’葡萄在红蓝光下花芽分化过程中转录因子和激素的比较转录组分析。

Comparative transcriptomic analysis of transcription factors and hormones during flower bud differentiation in 'Red Globe' grape under red‒blue light.

机构信息

College of Agriculture, Ningxia University, Yinchuan, 750021, China.

出版信息

Sci Rep. 2023 Jun 1;13(1):8932. doi: 10.1038/s41598-023-29402-5.

DOI:10.1038/s41598-023-29402-5
PMID:37264033
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10235105/
Abstract

Grape is a globally significant fruit-bearing crop, and the grape flower bud differentiation essential to fruit production is closely related to light quality. To investigate the regulatory mechanism of grape flower bud differentiation under red‒blue light, the transcriptome and hormone content were determined at four stages of flower bud differentiation. The levels of indole-3-acetic acid (IAA) and abscisic acid (ABA) in grape flower buds at all stages of differentiation under red‒blue light were higher than those in the control. However, the levels of cytokinins (CKs) and gibberellic acid (giberellins, GAs) fluctuated continuously over the course of flower bud differentiation. Moreover, many differentially expressed genes were involved in auxin, CK, GA, and the ABA signal transduction pathways. There were significant differences in the AUX/IAA, SAUR, A-RR, and ABF gene expression levels between the red‒blue light treatment and the control buds, especially in regard to the ABF genes, the expression levels of which were completely different between the two groups. The expression of GBF4 and AI5L2 in the control was always low, while the expression under red‒blue light increased. AI5L7 and AI5L5 expression levels showed an upwards trend in the control plant buds and gradually decreased in red‒blue light treatment plant buds. Through weighted gene coexpression network analysis, we determined that the transcription factors WRK48 (WRKY family), EF110 (ERF family), ABR1, CAMTA3 (CAMTA family), and HSFA3 (HSF family) may be involved in the regulation of the GBF4 gene. This study lays a foundation for further analysis of grape flower bud differentiation regulation under red‒blue light.

摘要

葡萄是一种全球重要的果实作物,而对果实生产至关重要的葡萄花芽分化与光质密切相关。为了研究红蓝光下葡萄花芽分化的调控机制,在花芽分化的四个阶段测定了转录组和激素含量。在红蓝光下,葡萄花芽分化各阶段的吲哚-3-乙酸(IAA)和脱落酸(ABA)水平均高于对照。然而,细胞分裂素(CKs)和赤霉素(giberellins,GAs)的水平在花芽分化过程中持续波动。此外,许多差异表达基因参与了生长素、CK、GA 和 ABA 信号转导途径。红蓝光处理与对照芽之间 AUX/IAA、SAUR、A-RR 和 ABF 基因表达水平存在显著差异,尤其是 ABF 基因,两组之间的表达水平完全不同。GBF4 和 AI5L2 在对照中的表达始终较低,而在红蓝光下的表达增加。AI5L7 和 AI5L5 在对照植物芽中的表达呈上升趋势,而在红蓝光处理植物芽中的表达逐渐下降。通过加权基因共表达网络分析,我们确定转录因子 WRK48(WRKY 家族)、EF110(ERF 家族)、ABR1、CAMTA3(CAMTA 家族)和 HSFA3(HSF 家族)可能参与了 GBF4 基因的调控。本研究为进一步分析红蓝光下葡萄花芽分化调控奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/0c0ce920e431/41598_2023_29402_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/7b54f65cf23b/41598_2023_29402_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/33f40674037b/41598_2023_29402_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/af3ef4f55f11/41598_2023_29402_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/a6e84fb8cb2b/41598_2023_29402_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/4cd10299725e/41598_2023_29402_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/d1e092e9cadc/41598_2023_29402_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/94a94f09dd66/41598_2023_29402_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/0c0ce920e431/41598_2023_29402_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/7b54f65cf23b/41598_2023_29402_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/33f40674037b/41598_2023_29402_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/af3ef4f55f11/41598_2023_29402_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/a6e84fb8cb2b/41598_2023_29402_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/4cd10299725e/41598_2023_29402_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/d1e092e9cadc/41598_2023_29402_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/94a94f09dd66/41598_2023_29402_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bc4/10235105/0c0ce920e431/41598_2023_29402_Fig8_HTML.jpg

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