Department of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, USA.
J Virol. 2023 Jul 27;97(7):e0066723. doi: 10.1128/jvi.00667-23. Epub 2023 Jun 13.
Receptor-binding proteins (RBPs) allow phages to dock onto their host and initiate infection through the recognition of proteinaceous or saccharidic receptors located on the cell surface. FhuA is the ferrichrome hydroxamate transporter in Escherichia coli and serves as a receptor for the well-characterized phages T1, T5, and phi80. To further characterize how other FhuA-dependent phages attach to FhuA, we isolated and published the genomes of three new FhuA-dependent coliphages: JLBYU37, JLBYU41, and JLBYU60. We identified the egions of FhuA involved in phage attachment by testing the effect of mutant alleles containing single-loop deletions of extracellular loops (L3, L4, L5, L8, L10, and L11) on phage infectivity. Deletion of loop 8 resulted in complete resistance to SO1-like phages JLBYU37 and JLBYU60 and the previously isolated vB_EcoD_Teewinot phage, but no single-loop deletions significantly altered the infection of T1-like JLBYU41. Additionally, lipopolysaccharide (LPS) truncation coupled with the L5 mutant significantly impaired the infectivity of JLBYU37 and JLBYU60. Moreover, significant reductions in the infectivity of JLBYU41 were observed upon LPS truncation in the L8 mutant strain. Analysis of the evolutionary relationships among FhuA-dependent phage RBPs highlights the conservation of L8 dependence in JLBYU37, JLBYU60, Teewinot, T5, and phi80, but also showcases how positive selective pressure and/or homologous recombination also selected for L4 dependence in T1 and even the lack of complete loop dependence in JLBYU41. Phage attachment is the first step of phage infection and plays a role in governing host specificity. Characterizing the interactions taking place between phage tail fibers and bacterial receptors that better equip bacteria to survive within the human body may provide insights to aid the development of phage therapeutics.
受体结合蛋白(RBPs)允许噬菌体通过识别位于细胞表面的蛋白质或糖受体来与宿主结合并启动感染。FhuA 是大肠杆菌中铁载体羟肟酸转运蛋白,是 well-characterized 噬菌体 T1、T5 和 phi80 的受体。为了进一步研究其他依赖 FhuA 的噬菌体如何附着在 FhuA 上,我们分离并发表了三种新的依赖 FhuA 的大肠杆菌噬菌体的基因组:JLBYU37、JLBYU41 和 JLBYU60。我们通过测试含有单个外环缺失的突变等位基因的影响来鉴定参与噬菌体附着的 FhuA 区域,这些外环包括 L3、L4、L5、L8、L10 和 L11。删除环 8 导致完全抵抗 SO1 样噬菌体 JLBYU37 和 JLBYU60 以及之前分离的 vB_EcoD_Teewinot 噬菌体,但没有单个环缺失明显改变 T1 样 JLBYU41 的感染。此外,LPS 截断与 L5 突变体结合显著降低了 JLBYU37 和 JLBYU60 的感染性。此外,在 L8 突变体菌株中 LPS 截断时,JLBYU41 的感染性显著降低。依赖 FhuA 的噬菌体 RBPs 的进化关系分析突出了 L8 依赖性在 JLBYU37、JLBYU60、Teewinot、T5 和 phi80 中的保守性,但也展示了正选择压力和/或同源重组如何选择 T1 中的 L4 依赖性,甚至在 JLBYU41 中缺乏完全的环依赖性。噬菌体附着是噬菌体感染的第一步,在控制宿主特异性方面发挥作用。阐明噬菌体尾部纤维与细菌受体之间发生的相互作用,可以更好地了解细菌在人体内存活的机制,从而为噬菌体治疗的发展提供帮助。