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Assessment of variability in the plasma 7k SomaScan proteomics assay.评估血浆 7k SomaScan 蛋白质组学检测的可变性。
Sci Rep. 2022 Oct 13;12(1):17147. doi: 10.1038/s41598-022-22116-0.
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IL-33 in COPD: the hunt for responder subgroups.慢性阻塞性肺疾病中的白细胞介素-33:寻找反应亚组
Lancet Respir Med. 2022 May;10(5):425-426. doi: 10.1016/S2213-2600(22)00005-4. Epub 2022 Mar 24.
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Whole genome sequence analysis of pulmonary function and COPD in 19,996 multi-ethnic participants.对 19996 名多民族参与者的肺功能和 COPD 的全基因组序列分析。
Nat Commun. 2020 Oct 14;11(1):5182. doi: 10.1038/s41467-020-18334-7.
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Phenome-wide Mendelian randomization mapping the influence of the plasma proteome on complex diseases.表型全基因组孟德尔随机化分析血浆蛋白质组对复杂疾病的影响。
Nat Genet. 2020 Oct;52(10):1122-1131. doi: 10.1038/s41588-020-0682-6. Epub 2020 Sep 7.
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Standardization of Spirometry 2019 Update. An Official American Thoracic Society and European Respiratory Society Technical Statement.肺功能测定标准化 2019 修订版。美国胸科学会和欧洲呼吸学会官方技术声明。
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Reply to Pouwels : Confounding Factors Affecting sRAGE as a Biomarker for Chronic Obstructive Pulmonary Disease.对普韦尔斯的回复:影响可溶性晚期糖基化终末产物受体作为慢性阻塞性肺疾病生物标志物的混杂因素。
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Genetic landscape of chronic obstructive pulmonary disease identifies heterogeneous cell-type and phenotype associations.慢性阻塞性肺疾病的遗传景观确定了不同的细胞类型和表型关联。
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New genetic signals for lung function highlight pathways and chronic obstructive pulmonary disease associations across multiple ancestries.新的肺功能遗传信号突出了多种血统中的途径和慢性阻塞性肺疾病的关联。
Nat Genet. 2019 Mar;51(3):481-493. doi: 10.1038/s41588-018-0321-7. Epub 2019 Feb 25.
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Multiethnic meta-analysis identifies ancestry-specific and cross-ancestry loci for pulmonary function.多民族荟萃分析确定了肺功能的种族特异性和跨种族基因座。
Nat Commun. 2018 Jul 30;9(1):2976. doi: 10.1038/s41467-018-05369-0.
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The unmet global burden of COPD.慢性阻塞性肺疾病未被满足的全球负担。
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不同队列中肺功能的系统标志物和 1 秒用力呼气量的下降。

Systemic Markers of Lung Function and Forced Expiratory Volume in 1 Second Decline across Diverse Cohorts.

机构信息

Cardiovascular Research Institute.

Division of Pulmonary, Critical Care, and Sleep Medicine, and.

出版信息

Ann Am Thorac Soc. 2023 Aug;20(8):1124-1135. doi: 10.1513/AnnalsATS.202210-857OC.

DOI:10.1513/AnnalsATS.202210-857OC
PMID:37351609
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10405603/
Abstract

Chronic obstructive pulmonary disease (COPD) is a complex disease characterized by airway obstruction and accelerated lung function decline. Our understanding of systemic protein biomarkers associated with COPD remains incomplete. To determine what proteins and pathways are associated with impaired pulmonary function in a diverse population. We studied 6,722 participants across six cohort studies with both aptamer-based proteomic and spirometry data (4,566 predominantly White participants in a discovery analysis and 2,156 African American cohort participants in a validation). In linear regression models, we examined protein associations with baseline forced expiratory volume in 1 second (FEV) and FEV/forced vital capacity (FVC). In linear mixed effects models, we investigated the associations of baseline protein levels with rate of FEV decline (ml/yr) in 2,777 participants with up to 7 years of follow-up spirometry. We identified 254 proteins associated with FEV in our discovery analyses, with 80 proteins validated in the Jackson Heart Study. Novel validated protein associations include kallistatin serine protease inhibitor, growth differentiation factor 2, and tumor necrosis factor-like weak inducer of apoptosis (discovery β = 0.0561,  = 4.05 × 10; β  = 0.0421,  = 1.12 × 10; and β = 0.0358,  = 1.67 × 10, respectively). In longitudinal analyses within cohorts with follow-up spirometry, we identified 15 proteins associated with FEV decline ( < 0.05), including elafin leukocyte elastase inhibitor and mucin-associated TFF2 (trefoil factor 2; β = -4.3 ml/yr,  = 0.049; β = -6.1 ml/yr,  = 0.032, respectively). Pathways and processes highlighted by our study include aberrant extracellular matrix remodeling, enhanced innate immune response, dysregulation of angiogenesis, and coagulation. In this study, we identify and validate novel biomarkers and pathways associated with lung function traits in a racially diverse population. In addition, we identify novel protein markers associated with FEV decline. Several protein findings are supported by previously reported genetic signals, highlighting the plausibility of certain biologic pathways. These novel proteins might represent markers for risk stratification, as well as novel molecular targets for treatment of COPD.

摘要

慢性阻塞性肺疾病(COPD)是一种以气道阻塞和肺功能加速下降为特征的复杂疾病。我们对与 COPD 相关的系统蛋白质生物标志物的了解仍不完整。为了确定在不同人群中与肺功能受损相关的蛋白质和途径。我们研究了六个队列研究中的 6722 名参与者,这些研究都有基于适配体的蛋白质组学和肺活量测定数据(在发现分析中包括 4566 名主要为白种人的参与者和在验证分析中包括 2156 名非裔美国人群参与者)。在线性回归模型中,我们研究了蛋白质与基线 1 秒用力呼气量(FEV)和 FEV/用力肺活量(FVC)的关联。在线性混合效应模型中,我们研究了 2777 名参与者的基线蛋白水平与 FEV 下降率(ml/yr)的关联,这些参与者的随访肺活量测定时间长达 7 年。在我们的发现分析中,我们确定了 254 种与 FEV 相关的蛋白质,其中 80 种在杰克逊心脏研究中得到了验证。新的验证蛋白关联包括激肽释放酶抑制剂、生长分化因子 2 和肿瘤坏死因子样弱凋亡诱导因子(发现β=0.0561,p=4.05×10;β=0.0421,p=1.12×10;β=0.0358,p=1.67×10,分别)。在有随访肺活量测定的队列内的纵向分析中,我们确定了 15 种与 FEV 下降相关的蛋白质(p<0.05),包括弹性蛋白酶抑制剂和粘蛋白相关的 TFF2(三叶因子 2;β=-4.3ml/yr,p=0.049;β=-6.1ml/yr,p=0.032,分别)。我们研究中突出的途径和过程包括细胞外基质重塑异常、固有免疫反应增强、血管生成失调和凝血。在这项研究中,我们在一个种族多样化的人群中确定和验证了与肺功能特征相关的新型生物标志物和途径。此外,我们还确定了与 FEV 下降相关的新型蛋白质标志物。一些蛋白质发现得到了先前报道的遗传信号的支持,突出了某些生物学途径的合理性。这些新的蛋白质可能代表风险分层的标志物,也是 COPD 治疗的新分子靶点。