Department of Applied Mathematics and Computer Science, Technical University of Denmark, Denmark; Danish Research Centre for Magnetic Resonance, Centre for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Denmark; Sino-Danish Centre for Education and Research, Aarhus, Denmark.
Danish Research Centre for Magnetic Resonance, Centre for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital Amager and Hvidovre, Denmark.
Neuroimage. 2023 Aug 15;277:120259. doi: 10.1016/j.neuroimage.2023.120259. Epub 2023 Jun 29.
Generating realistic volume conductor models for forward calculations in electroencephalography (EEG) is not trivial and several factors contribute to the accuracy of such models, two of which are its anatomical accuracy and the accuracy with which electrode positions are known. Here, we investigate effects of anatomical accuracy by comparing forward solutions from SimNIBS, a tool which allows state-of-the-art anatomical modeling, with well-established pipelines in MNE-Python and FieldTrip. We also compare different ways of specifying electrode locations when digitized positions are not available such as transformation of measured positions from standard space and transformation of a manufacturer layout. Substantial effects of anatomical accuracy were seen throughout the entire brain both in terms of field topography and magnitude with SimNIBS generally being more accurate than the pipelines in MNE-Python and FieldTrip. Topographic and magnitude effects were particularly pronounced for MNE-Python which uses a three-layer boundary element method (BEM) model. We attribute these mainly to the coarse representation of the anatomy used in this model, in particular differences in skull and cerebrospinal fluid (CSF). Effects of electrode specification method were evident in occipital and posterior areas when using a transformed manufacturer layout whereas transforming measured positions from standard space generally resulted in smaller errors. We suggest modeling the anatomy of the volume conductor as accurately possible and we hope to facilitate this by making it easy to export simulations from SimNIBS to MNE-Python and FieldTrip for further analysis. Likewise, if digitized electrode positions are not available, a set of measured positions on a standard head template may be preferable to those specified by the manufacturer.
生成逼真的容积导体模型用于脑电图(EEG)中的正向计算并非易事,有几个因素会影响模型的准确性,其中两个因素是其解剖学准确性和电极位置的准确性。在这里,我们通过比较 SimNIBS(一种允许使用最先进的解剖建模工具)与 MNE-Python 和 FieldTrip 中成熟的管道的正向解,研究解剖学准确性的影响。我们还比较了在没有数字化电极位置的情况下指定电极位置的不同方法,例如从标准空间转换测量位置和转换制造商布局。在整个大脑中,无论是在电场拓扑还是幅度方面,解剖学准确性都有很大的影响,SimNIBS 通常比 MNE-Python 和 FieldTrip 中的管道更准确。特别是对于使用三层边界元方法(BEM)模型的 MNE-Python,地形和幅度的影响更为明显。我们主要将这些归因于该模型中使用的解剖结构的粗糙表示,特别是颅骨和脑脊液(CSF)之间的差异。当使用转换后的制造商布局时,电极指定方法的影响在枕部和后部区域明显,而从标准空间转换测量位置通常会导致较小的误差。我们建议尽可能准确地对容积导体的解剖结构进行建模,我们希望通过使其易于从 SimNIBS 导出模拟到 MNE-Python 和 FieldTrip 进行进一步分析来促进这一点。同样,如果没有数字化的电极位置,标准头部模板上的一组测量位置可能比制造商指定的位置更可取。