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构建并鉴定一种新型的小型丝状噬菌体亚单位用于靶向哺乳动物基因转移。

Construction and characterization of a novel miniaturized filamentous phagemid for targeted mammalian gene transfer.

机构信息

School of Pharmacy, University of Waterloo, Waterloo, Canada.

出版信息

Microb Cell Fact. 2023 Jul 10;22(1):124. doi: 10.1186/s12934-023-02135-w.

Abstract

BACKGROUND

As simplistic proteinaceous carriers of genetic material, phages offer great potential as targeted vectors for mammalian transgene delivery. The filamentous phage M13 is a single-stranded DNA phage with attractive characteristics for gene delivery, including a theoretically unlimited DNA carrying capacity, amenability to tropism modification via phage display, and a well-characterized genome that is easy to genetically modify. The bacterial backbone in gene transfer plasmids consists of elements only necessary for amplification in prokaryotes, and, as such, are superfluous in the mammalian cell. These problematic elements include antibiotic resistance genes, which can disseminate antibiotic resistance, and CpG motifs, which are inflammatory in animals and can lead to transgene silencing.

RESULTS

Here, we examined how M13-based phagemids could be improved for transgene delivery by removing the bacterial backbone. A transgene cassette was flanked by isolated initiation and termination elements from the phage origin of replication. Phage proteins provided in trans by a helper would replicate only the cassette, without any bacterial backbone. The rescue efficiency of "miniphagemids" from these split origins was equal to, if not greater than, isogenic "full phagemids" arising from intact origins. The type of cassette encoded by the miniphagemid as well as the choice of host strain constrained the efficiency of phagemid rescue.

CONCLUSIONS

The use of two separated domains of the f1 ori improves upon a single wildtype origin while still resulting in high titres of miniphagemid gene transfer vectors. Highly pure lysates of miniaturized phagemids could be rapidly obtained in a straightforward procedure without additional downstream processing.

摘要

背景

作为遗传物质的简单蛋白质载体,噬菌体在作为哺乳动物转基因传递的靶向载体方面具有巨大潜力。丝状噬菌体 M13 是一种单链 DNA 噬菌体,具有基因传递的诱人特性,包括理论上无限的 DNA 承载能力、通过噬菌体展示进行趋向性修饰的易感性,以及易于遗传修饰的特征明确的基因组。基因转移质粒中的细菌骨架仅由原核生物中扩增所必需的元件组成,因此在哺乳动物细胞中是多余的。这些有问题的元件包括抗生素抗性基因,它们可以传播抗生素抗性,以及 CpG 基序,它们在动物中具有炎症性,并且可以导致转基因沉默。

结果

在这里,我们研究了如何通过去除细菌骨架来改进基于 M13 的噬菌粒进行转基因传递。一个转基因盒被噬菌体复制起点的分离起始和终止元件所包围。辅助噬菌体提供的噬菌体蛋白只会复制盒,而不复制任何细菌骨架。来自这些分裂起点的“迷你噬菌粒”的拯救效率与来自完整起点的同基因“全噬菌粒”相等,如果不是更高的话。迷你噬菌粒编码的盒类型以及宿主菌株的选择限制了噬菌粒的拯救效率。

结论

使用 fl ori 的两个分离域可以改进单个野生型起源,同时仍然产生高滴度的迷你噬菌粒基因转移载体。通过简单的程序,可以快速获得高度纯化的小型噬菌粒的裂解物,而无需额外的下游处理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ac1/10334589/53d6cfedfac6/12934_2023_2135_Fig1_HTML.jpg

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