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鉴定与糖酵解相关的 miRNA 特征,用于预测乳腺癌患者的生存情况。

Identification of a glycolysis-related miRNA Signature for Predicting Breast cancer Survival.

机构信息

Department of Galactophore, Tianjin Central Hospital of Gynecology and Obstetrics, No. 156 Nankai Sanma Road, Tianjin, Nankai District, 300100, P.R. China.

Department of General Surgery, Tianjin Hospital, Tianjin, Hexi District, 300211, P.R. China.

出版信息

Mol Biotechnol. 2024 Aug;66(8):1988-2006. doi: 10.1007/s12033-023-00837-5. Epub 2023 Aug 3.

Abstract

Breast cancer (BC) is a common type of cancer and has a poor prognosis. In this study, we collected the mRNA and miRNA expression profiles of BC patients were obtained from The Cancer Genome Atlas (TCGA) to explore a novel prognostic strategy for BC patients using bioinformatics tools. We found that six glycolysis-related miRNAs (GRmiRs, including hsa-mir-1247, hsa-mir148b, hsa-mir-133a-2, has-mir-1307, hsa-mir-195 and hsa-mir-1258) were correlated with prognosis of BC samples. The risk score model was established based on 6 prognosis-associated GRmiRs. The outcome of high risk group was significantly poorer. Cox regression analysis showed that risk score was an independent prognostic factor. Differentially expressed genes identified between high and low risk groups were mainly enriched in inflammation and immune-related signaling pathways. The proportion of infiltration of 12 kinds of immune cells in high and low risk groups were significantly different. Risk score was closely associated with many immune indexes. Multiple DEGRGs and miRNAs were associated with drugs. In conclusion, glycolysis-related miRNA signature effectively predicts BC prognosis.

摘要

乳腺癌(BC)是一种常见的癌症,预后较差。本研究从癌症基因组图谱(TCGA)中收集了 BC 患者的 mRNA 和 miRNA 表达谱,使用生物信息学工具探讨 BC 患者的新预后策略。我们发现 6 个糖酵解相关 miRNA(GRmiRs,包括 hsa-mir-1247、hsa-mir148b、hsa-mir-133a-2、has-mir-1307、hsa-mir-195 和 hsa-mir-1258)与 BC 样本的预后相关。基于 6 个与预后相关的 GRmiRs 建立了风险评分模型。高风险组的结局明显较差。Cox 回归分析表明,风险评分是独立的预后因素。高低风险组之间鉴定的差异表达基因主要富集在炎症和免疫相关信号通路中。高、低风险组 12 种免疫细胞浸润比例差异显著。风险评分与许多免疫指标密切相关。多个 DEGRGs 和 miRNAs 与药物相关。总之,糖酵解相关 miRNA 特征可有效预测 BC 预后。

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