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来自佛罗里达州及其他地区的(线虫纲:拟毛刺线虫科)松材线虫属线虫的形态学和分子多样性以及该属的分子系统发育

Morphological and Molecular Diversity among Pin Nematodes of the Genus (Nematoda: Paratylenchidae) from Florida and Other Localities and Molecular Phylogeny of the Genus.

作者信息

Álvarez-Ortega Sergio, Subbotin Sergei A, Wang Koon-Hui, Stanley Jason D, Vau Silvia, Crow William, Inserra Renato N

机构信息

Departamento de Biología y Geología, Física y Química Inorgánica, Universidad Rey Juan Carlos, Campus de Móstoles, 28933 Madrid, Spain.

Plant Pest Diagnostic Center, California Department of Food and Agriculture, 3294 Meadowview Road, Sacramento, CA 95832, USA.

出版信息

Plants (Basel). 2023 Jul 26;12(15):2770. doi: 10.3390/plants12152770.

Abstract

Pin nematodes ( spp.) are root parasites found worldwide. They have different life cycles and feeding habits and can damage a wide range of plants. A remarkable diversity of pin nematode species was found in soil samples from Florida and other states of the USA, Canada, and Spain. Using integrative taxonomy, two new species ( sp. n. and sp. n.), six valid species (, , , , (= syn. n.), and ), and two undescribed species were identified from Florida; , , , , and were found in California, in Hawaii, in Oregon and Washington, and one new species, sp. n., in Alaska. Outside the USA, was detected in samples from Canada and Spain as well as and sp. from Spain. The pin nematode species from Belgium and Russia identified in former studies as sp. F was herein described as a new species with the name of sp. n., using a population from Alaska. Previously reported molecular type A of from Hawaii was reclassified as sp. n., using a population from Florida. sp. n. from Florida has obese sedentary females with a stylet 63-71 µm long. The results of the molecular analysis of from Florida and China indicated that it was conspecific with from Hawaii and considered here as its junior synonym. New 26 D2-D3 expansion segments of 28S rRNA, 17 ITS rRNA, and 20 gene sequences were obtained in this study. Phylogenetic relationships of are reconstructed using the D2-D3 of 28S rRNA, ITS rRNA, and gene sequences. Congruence of molecular and morphological evolution and species identification problems are discussed. Obese females were found in two major clades of . The problem of reference materials is discussed, and it is proposed to make more efforts to collect topotype materials of known species for molecular study.

摘要

细杆属线虫(多种)是遍布全球的根部寄生虫。它们具有不同的生命周期和取食习性,会对多种植物造成损害。在美国佛罗里达州以及美国其他州、加拿大和西班牙的土壤样本中发现了种类繁多的细杆属线虫。运用综合分类学方法,从佛罗里达州鉴定出两个新物种(新种1和新种2)、六个有效物种(物种1、物种2、物种3、物种4、物种5(=新异名)和物种6)以及两个未描述的物种;在加利福尼亚州发现了物种7、物种8、物种9、物种10和物种11,在夏威夷发现了物种12,在俄勒冈州和华盛顿州发现了物种13,在阿拉斯加发现了一个新物种,即新种3。在美国境外,在加拿大和西班牙的样本中检测到了物种14,在西班牙还检测到了物种15和新种4。先前在比利时和俄罗斯研究中鉴定为细杆属线虫F种的线虫,在此使用来自阿拉斯加的种群被描述为一个新物种,命名为新种5。先前报道的来自夏威夷的分子类型A的线虫,使用来自佛罗里达州的种群重新分类为新种6。来自佛罗里达州的新种6具有肥胖的固定型雌虫,口针长63 - 71微米。对来自佛罗里达州和中国的线虫进行分子分析的结果表明,它与来自夏威夷的线虫同种,在此被视为其次异名。在本研究中获得了28S rRNA的26个新的D2 - D3扩展片段、17个ITS rRNA和20个基因序列。利用28S rRNA的D2 - D3、ITS rRNA和基因序列重建了线虫的系统发育关系。讨论了分子与形态进化的一致性以及物种鉴定问题。在两个主要的线虫进化枝中发现了肥胖雌虫。讨论了参考材料的问题,并建议加大力度收集已知线虫物种的地模材料用于分子研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bea6/10421193/c65918b70b31/plants-12-02770-g007.jpg

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