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植物寄生线虫属（线虫纲：拟短体线虫亚科）的综合分类学与分子系统发育：将物种与分子条形码关联起来

Integrative Taxonomy and Molecular Phylogeny of the Plant-Parasitic Nematode Genus (Nematoda: Paratylenchinae): Linking Species with Molecular Barcodes.

作者信息

Singh Phougeishangbam Rolish, Karssen Gerrit, Couvreur Marjolein, Subbotin Sergei A, Bert Wim

机构信息

Nematology Research Unit, Department of Biology, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium.

National Plant Protection Organization, Wageningen Nematode Collection, P.O. Box 9102, 6700 HC Wageningen, The Netherlands.

出版信息

Plants (Basel). 2021 Feb 22;10(2):408. doi: 10.3390/plants10020408.

DOI:10.3390/plants10020408
PMID:33671787
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7926417/
Abstract

Pin nematodes of the genus are obligate ectoparasites of a wide variety of plants that are distributed worldwide. In this study, individual morphologically vouchered nematode specimens of fourteen species, including and , are unequivocally linked to the D2-D3 of 28S, ITS, 18S rRNA and gene sequences. Combined with scanning electron microscopy and a molecular analysis of an additional nine known and thirteen unknown species originating from diverse geographic regions, a total of 92 D2-D3 of 28S, 41 ITS, 57 18S rRNA and 111 new gene sequences are presented. , and are recorded for the first time in Belgium and for the first time in Europe. is an excellent example of an incredibly diverse yet morphologically minimalistic plant-parasitic genus, and this study provides an integrated analysis of all available data, including coalescence-based molecular species delimitation, resulting in an updated phylogeny and the corrective reassignment of 18 D2-D3 of 28S, 3 ITS, 3 18S rRNA and 25 gene sequences that were previously unidentified or incorrectly classified.

摘要

属的针状线虫是广泛分布于世界各地的多种植物的专性外寄生线虫。在本研究中，包括和在内的14个种的形态学鉴定的线虫个体标本与28S、ITS、18S rRNA和基因序列的D2-D3明确相关。结合扫描电子显微镜以及对来自不同地理区域的另外9个已知种和13个未知种的分子分析，共给出了92个28S的D2-D3、41个ITS、57个18S rRNA和111个新基因序列。在比利时首次记录到、和，在欧洲首次记录到。是一个极其多样但形态简约的植物寄生属的极佳例子，本研究对所有可用数据进行了综合分析，包括基于合并的分子物种界定，从而得到了更新的系统发育树，并对先前未鉴定或分类错误的18个28S的D2-D3、3个ITS、3个18S rRNA和25个基因序列进行了校正重新分类。

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