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焦亡相关长链非编码RNA风险特征在卵巢癌预后及免疫系统中的作用

The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system.

作者信息

Wu Yanling, Liang Lei, Li Qin, Shu Lilu, Wang Peter, Huang Shufeng

机构信息

Department of Gynecology, Shenzhen Qianhai Shekou Free Trade Zone Hospital, Shenzhen, 518067, Guangdong, China.

Department of Research and Development, Zhejiang Zhongwei Medical Research Center, Hangzhou, 310018, Zhejiang, China.

出版信息

Discov Oncol. 2023 Aug 19;14(1):149. doi: 10.1007/s12672-023-00767-3.

Abstract

Ovarian cancer is a leading cause of death in females with gynecologic cancers. Pyroptosis is a relatively new discovered programmed cell death that is believed to be associated with inflammation. However, studies on pyroptosis-related lncRNAs in ovarian cancer are limited. In this study, we identified 29 pyroptosis-related genes and screened out 72 pyroptosis-related lncRNAs. Furthermore, the 72 lncRNAs were eliminated to 2 survival-related lncRNAs using Cox regression and Lasso regression to build an ovarian cancer prognostic prediction signature and were further validated on the test set. We adopted a riskscore from the two-gene signature, and the survival in low-risk group was higher than the high-risk group. Functional enrichment analysis indicated that the differentially expressed genes (DEGs) between two risk groups were associated with tumor immunity. This study implies that pyroptosis-related genes are closely related to tumor immunity and could be potential therapeutic factors for ovarian cancer treatment.

摘要

卵巢癌是妇科癌症中女性死亡的主要原因。细胞焦亡是一种相对新发现的程序性细胞死亡,被认为与炎症有关。然而,关于卵巢癌中与细胞焦亡相关的长链非编码RNA(lncRNA)的研究有限。在本研究中,我们鉴定了29个与细胞焦亡相关的基因,并筛选出72个与细胞焦亡相关的lncRNA。此外,使用Cox回归和Lasso回归将这72个lncRNA缩减为2个与生存相关的lncRNA,以构建卵巢癌预后预测特征,并在测试集上进一步验证。我们采用了来自双基因特征的风险评分,低风险组的生存率高于高风险组。功能富集分析表明,两个风险组之间的差异表达基因(DEG)与肿瘤免疫相关。本研究表明,与细胞焦亡相关的基因与肿瘤免疫密切相关,可能是卵巢癌治疗的潜在治疗因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a83/10439870/2be508b27310/12672_2023_767_Fig1_HTML.jpg

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