Department of Biochemistry, IRCGP, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Precision Medicine Research Center, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Yonsei Med J. 2023 Sep;64(9):531-540. doi: 10.3349/ymj.2023.0096.
For precision medicine, exploration and monitoring of molecular biomarkers are essential. However, in advanced gastric cancer (GC) with visceral lesions, an invasive procedure cannot be performed repeatedly for the follow-up of molecular biomarkers.
To verify the clinical implication of serial liquid biopsies targeting circulating tumor DNA (ctDNA) on treatment response, we conducted targeted deep sequencing for serially collected ctDNA of 15 HER2-positive metastatic GC patients treated with anti-PD-1 inhibitor in combination with standard systemic treatment.
In the baseline ctDNAs, 14 patients (93%) harbored more than one genetic alteration. A number of mutations in well-known cancer-related genes, such as and , were identified. Copy number alterations were identified in eight GCs (53.3%), and amplification of the gene (6/15, 40.0%) was the most recurrent. When we calculated the mean variant allele frequency (VAF) of mutations in each ctDNA as the molecular tumor burden index (mTBI), the mTBI trend was largely consistent with the VAF profiles in both responder and non-responder groups. Notably, in the longitudinal analysis of ctDNA, mTBI provided 2-42 weeks (mean 13.4 weeks) lead time in the detection of disease progression compared to conventional follow-up with CT imaging.
Our data indicate that the serial genetic alteration profiling of ctDNA is feasible to predict treatment response in HER2-positive GC patients in a minimally invasive manner. Practically, ctDNA profiles are useful not only for the molecular diagnosis of GC but also for the selection of GC patients with poor prognosis for systemic treatment (ClinicalTrials.gov identifier: NCT02901301).
对于精准医学,探索和监测分子生物标志物至关重要。然而,对于有内脏病变的晚期胃癌(GC),不能为了监测分子生物标志物而重复进行有创性操作。
为了验证针对循环肿瘤 DNA(ctDNA)的连续液体活检在治疗反应中的临床意义,我们对 15 名接受抗 PD-1 抑制剂联合标准系统治疗的 HER2 阳性转移性 GC 患者的连续收集的 ctDNA 进行了靶向深度测序。
在基线 ctDNA 中,14 名患者(93%)存在一种以上的基因改变。鉴定出了许多与癌症相关的基因中的突变,如 和 。在 8 名 GC 中鉴定出了拷贝数改变(53.3%),并且 基因的扩增(6/15,40.0%)最为常见。当我们计算每个 ctDNA 中突变的平均变异等位基因频率(VAF)作为分子肿瘤负担指数(mTBI)时,mTBI 趋势与应答者和无应答者组的 VAF 谱大致一致。值得注意的是,在 ctDNA 的纵向分析中,与常规 CT 成像随访相比,mTBI 可提前 2-42 周(平均 13.4 周)检测到疾病进展。
我们的数据表明,ctDNA 的连续基因改变分析可微创地预测 HER2 阳性 GC 患者的治疗反应。实际上,ctDNA 谱不仅对 GC 的分子诊断有用,而且对选择预后不良的 GC 患者进行全身治疗也有用(ClinicalTrials.gov 标识符:NCT02901301)。