Contreras-Díaz Roberto, Carevic Felipe S, van den Brink Liesbeth
Núcleo Milenio de Ecología Histórica Aplicada para los Bosques Áridos (AFOREST), CRIDESAT, Universidad de Atacama, Copiapó, Chile.
Laboratorio de Ecología Vegetal, Facultad de Recursos Naturales Renovables, Núcleo Milenio de Ecología Histórica Aplicada para los Bosques Áridos (AFOREST), Universidad Arturo Prat, Iquique, Chile.
Front Genet. 2023 Aug 10;14:1226052. doi: 10.3389/fgene.2023.1226052. eCollection 2023.
Chañar ( (Gill., ex Hook. & Arn.) Burkart) has been highly significant for indigenous people in the Atacama Desert for over 3,000 years. Through evolutionary processes, the mitogenome likely underwent changes facilitating its adaptation to the extreme conditions of the Atacama Desert. Here, we compare the mitochondrial genome of with those of other family species. The complete mitogenome of was sequenced and assembled, making it the first in the genus . The mitogenome contained 383,963 base pairs, consisting of 33 protein coding genes, 21 transfer RNA genes, and 3 ribosomal RNA genes. The Chañar mitogenome is relatively compact, and has two intact genes ( and ) which were not observed in most other species. Additionally, Chañar possessed the highest amount of mitochondrial DNA of plastid origin among angiosperm species. The phylogenetic analysis of the mitogenomes of Chañar and 12 other taxa displayed a high level of consistency in taxonomic classification, when compared to those of the plastid genome. was subjected to positive selection, while the and were subjected to neutral selection. This study provides valuable information regarding its ability to survive the extreme environmental conditions of the Atacama Desert.
查尼亚尔树((吉尔,胡克和阿诺德引) 布尔卡特)在3000多年来对阿塔卡马沙漠的原住民具有极其重要的意义。通过进化过程,线粒体基因组可能发生了变化,以促进其适应阿塔卡马沙漠的极端条件。在这里,我们将查尼亚尔树的线粒体基因组与其他藜科物种的线粒体基因组进行比较。对查尼亚尔树的完整线粒体基因组进行了测序和组装,使其成为该属中的第一个。该线粒体基因组包含383,963个碱基对,由33个蛋白质编码基因、21个转运RNA基因和3个核糖体RNA基因组成。查尼亚尔树的线粒体基因组相对紧凑,并且有两个完整的基因(和),这在大多数其他物种中未观察到。此外,在被子植物物种中,查尼亚尔树拥有来自质体的线粒体DNA的最高含量。与质体基因组的系统发育分析相比,查尼亚尔树和其他12个分类群的线粒体基因组的系统发育分析在分类学分类上显示出高度的一致性。受到正选择,而和受到中性选择。这项研究提供了关于其在阿塔卡马沙漠极端环境条件下生存能力的有价值信息。