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[具体物种名]、[具体物种名]种及[具体物种名]的线粒体基因组:内含子导致的扩增。

The mitogenomes of , sp., and : expansion by introns.

作者信息

Mukhopadhyay Jigeesha, Wai Alvan, Hausner Georg

机构信息

Department of Microbiology, University of Manitoba, Winnipeg, MB, Canada.

出版信息

Front Microbiol. 2023 Aug 10;14:1240407. doi: 10.3389/fmicb.2023.1240407. eCollection 2023.

Abstract

INTRODUCTION

Many members of the Ophiostomatales are of economic importance as they are bark-beetle associates and causative agents for blue stain on timber and in some instances contribute towards tree mortality. The taxonomy of these fungi has been challenging due to the convergent evolution of many traits associated with insect dispersal and a limited number of morphological characters that happen to be highly pleomorphic. This study examines the mitochondrial genomes for three members of [ (also known as ), (also known as ), and sp. WIN(M)1376)].

METHODS

Illumina sequencing combined with gene and intron annotations and phylogenetic analysis were performed.

RESULTS

Sequence analysis showed that gene content and gene synteny are conserved but mitochondrial genome sizes were variable: at 63,821 bp, sp. WIN(M)1376 at 81,823 bp and at 104,547 bp. The variation in size is due to the number of introns and intron-associated open reading frames. Phylogenetic analysis of currently available mitochondrial genomes for members of the Ophiostomatales supports currently accepted generic arrangements within this order and specifically supports the separation of members with Leptographium-like conidiophores into two genera, with grouping with and aligning with .

DISCUSSION

Mitochondrial genomes are promising sequences for resolving evolutionary relationships within the Ophiostomatales.

摘要

引言

许多长喙壳目成员具有经济重要性,因为它们与树皮甲虫相关联,是木材蓝变的病原体,在某些情况下还会导致树木死亡。由于许多与昆虫传播相关的性状趋同进化,以及一些恰好具有高度多态性的形态特征数量有限,这些真菌的分类学一直具有挑战性。本研究检测了[(也称为)、(也称为)和WIN(M)1376菌株]三个成员的线粒体基因组。

方法

进行了Illumina测序,并结合基因和内含子注释以及系统发育分析。

结果

序列分析表明,基因含量和基因共线性是保守的,但线粒体基因组大小可变:为63,821 bp,WIN(M)1376菌株为81,823 bp,为104,547 bp。大小差异是由于内含子和与内含子相关的开放阅读框的数量不同。对长喙壳目成员目前可用的线粒体基因组进行的系统发育分析支持该目内目前公认的属的划分,特别支持将具有类Leptographium分生孢子梗的成员分为两个属,与归为一类,与归为一类。

讨论

线粒体基因组是解决长喙壳目内进化关系的有前景的序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f389/10448965/f4fc7c05b4e8/fmicb-14-1240407-g001.jpg

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