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[物种名称1]和[物种名称2]的线粒体基因组及其与长喙壳目其他成员的比较。

The Mitogenomes of and and Comparisons With Other Members of the Ophiostomatales.

作者信息

Zubaer Abdullah, Wai Alvan, Patel Nikita, Perillo Jordan, Hausner Georg

机构信息

Department of Microbiology, University of Manitoba, Winnipeg, MB, Canada.

出版信息

Front Microbiol. 2021 Feb 10;12:618649. doi: 10.3389/fmicb.2021.618649. eCollection 2021.

Abstract

Fungi assigned to the Ophiostomatales are of economic concern as many are blue-stain fungi and some are plant pathogens. The mitogenomes of two blue-stain fungi, and , were sequenced and compared with currently available mitogenomes for other members of the Ophiostomatales. Species representing various genera within the Ophiostomatales have been examined for gene content, gene order, phylogenetic relationships, and the distribution of mobile elements. Gene synteny is conserved among the Ophiostomatales but some members were missing the gene. A genome wide intron landscape has been prepared to demonstrate the distribution of the mobile genetic elements (group I and II introns and homing endonucleases) and to provide insight into the evolutionary dynamics of introns among members of this group of fungi. Examples of complex introns or nested introns composed of two or three intron modules have been observed in some species. The size variation among the mitogenomes (from 23.7 kb to about 150 kb) is mostly due to the presence and absence of introns. Members of the genus appear to have the smallest mitogenomes due to loss of introns. The taxonomy of the Ophiostomatales has recently undergone considerable revisions; however, some lineages remain unresolved. The data showed that genera such as appear to be polyphyletic and the separation of from is justified.

摘要

被归类于长喙壳目(Ophiostomatales)的真菌具有经济重要性,因为许多是蓝变真菌,有些还是植物病原体。对两种蓝变真菌的线粒体基因组进行了测序,并与长喙壳目其他成员目前可用的线粒体基因组进行了比较。已对代表长喙壳目内不同属的物种进行了基因含量、基因顺序、系统发育关系和移动元件分布的研究。长喙壳目成员之间基因同线性是保守的,但一些成员缺少 基因。已绘制全基因组内含子图谱,以展示移动遗传元件(I 组和 II 组内含子及归巢内切酶)的分布,并深入了解该组真菌成员之间内含子的进化动态。在一些物种中观察到了由两个或三个内含子模块组成的复杂内含子或嵌套内含子的例子。线粒体基因组之间的大小差异(从 23.7 kb 到约 150 kb)主要是由于内含子的有无。由于内含子的丢失, 属的成员似乎具有最小的线粒体基因组。长喙壳目的分类最近经历了相当大的修订;然而,一些谱系仍未解决。数据表明,诸如 等属似乎是多系的,并且将 与 分开是合理的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab0c/7902536/b34116c8a76d/fmicb-12-618649-g001.jpg

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