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关于俄罗斯远东地区新的终末宿主的吸虫 Odhner,1911 年的完整线粒体基因组的报告,以及从线粒体基因组序列推断出的 Digenea 中 Azygiidae 的意外系统发育。

A report on the complete mitochondrial genome of the trematode Odhner, 1911, its new definitive host from the Russian Far East, and unexpected phylogeny of Azygiidae within Digenea, as inferred from mitogenome sequences.

机构信息

Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch, Russian Academy of Sciences, Vladivostok, Russia.

Department of Cell Biology and Genetics, Far Eastern Federal University, Vladivostok, Russia.

出版信息

J Helminthol. 2023 Sep 1;97:e69. doi: 10.1017/S0022149X23000500.

Abstract

New data on the complete mitochondrial genome of (Azygiidae) were obtained by the next-generation sequencing (NGS) approach. The mitochondrial DNA (mtDNA) of had a length of 13 857 bp and included 12 protein-coding genes, two ribosomal genes, 22 transfer RNA genes, and two non-coding regions. The nucleotide sequences of the complete mitochondrial genomes of two specimens differed from each other by 0.12 ± 0.03%. Six of 12 protein-coding genes demonstrated intraspecific variation. The difference between the nucleotide sequences of the complete mitochondrial genomes of and was 26.95 ± 0.35%; the interspecific variation of protein-coding genes between and ranged from 20.5 ± 0.9% (1) to 30.7 ± 1.2% (5). The observed gene arrangement in the mtDNA sequence of was identical to that of Codon usage and amino acid frequencies were highly similar between and The results of phylogenetic analyses based on mtDNA protein-coding regions showed that is closely related to (belonging to the same suborder, Azygiida) that formed a distinct early-diverging branch relative to all other Digenea. A preliminary morphological analysis of paratypes of the two azygiid specimens studied showed visible morphological differences between them. The specimen extracted from Sakhalin taimen () was most similar to Thus, we here provide the first record of a new definitive host, , for and also molecular characteristics of the trematode specimens.

摘要

采用新一代测序(NGS)方法获得了 (Azygiidae)完整线粒体基因组的新数据。 的线粒体 DNA(mtDNA)长 13857bp,包括 12 个蛋白质编码基因、2 个核糖体基因、22 个转移 RNA 基因和 2 个非编码区。两个 标本的完整线粒体基因组核苷酸序列差异为 0.12±0.03%。12 个蛋白质编码基因中有 6 个存在种内变异。与 相比,完整线粒体基因组核苷酸序列的差异为 26.95±0.35%;与 之间蛋白质编码基因的种间变异范围为 20.5±0.9%(1)至 30.7±1.2%(5)。 在 mtDNA 序列中观察到的基因排列与 相同。密码子使用和氨基酸频率在 与 之间高度相似。基于 mtDNA 蛋白质编码区的系统发育分析结果表明, 与 (属于同一亚目,Azygiida)密切相关,与所有其他吸虫相比,它形成了一个明显的早期分支。对所研究的两个 Azygiidae 标本的副型进行的初步形态分析表明,它们之间存在明显的形态差异。从库页岛鱒鱼()中提取的标本与 最为相似。因此,我们在此首次记录了 的新终末宿主 ,并提供了吸虫标本的分子特征。

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