International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan.
Global Station for Zoonosis Control, GI-CoRE, Hokkaido University, Sapporo, Japan.
Front Cell Infect Microbiol. 2023 Aug 1;13:1194608. doi: 10.3389/fcimb.2023.1194608. eCollection 2023.
Ovine babesiosis, caused by , is an acute, lethal, and endemic disease worldwide and causes a huge economic loss to animal industry. Pathogen genome sequences can be utilized for selecting diagnostic markers, drug targets, and antigens for vaccine development; however, those for have not been available so far. In this study, we obtained a draft genome sequence for isolated from an infected sheep in Turkey. The genome size was 7.81 Mbp with 3,419 protein-coding genes. It consisted of 41 contigs, and the N was 526 Kbp. There were 259 orthologs identified among eight spp., , and . A phylogeny was estimated on the basis of the orthologs, which showed to be closest to There were 43 genes identified using hmm model as well. They formed a discriminating cluster to other multigene family of spp. but showed certain similarities to those of , , and sp. Xinjiang, which is consistent with the phylogeny. Comparative genomics among and elucidated uniquely evolved genes in these species, which may account for the adaptation.
绵羊巴贝斯虫病由 引起,是一种在全球范围内普遍存在的急性、致命性和地方性疾病,给动物产业造成了巨大的经济损失。病原体基因组序列可用于选择诊断标志物、药物靶点和疫苗开发用抗原;然而,到目前为止,还没有 的基因组序列可用。在本研究中,我们从土耳其感染绵羊中分离到一株 ,获得了其基因组序列草图。该基因组大小为 7.81 Mbp,包含 3419 个蛋白质编码基因。它由 41 个连续序列组成,N 为 526 Kbp。在 8 个 spp.、 、和 中鉴定到 259 个直系同源基因。基于直系同源基因构建的系统发育树显示 与 最为接近。此外,还使用 hmm 模型鉴定到 43 个 基因。它们形成了一个与其他 spp.的多基因家族区分开的聚类,但与 、 、和 sp. Xinjiang 的某些基因具有一定的相似性,这与系统发育树一致。 与 之间的比较基因组学揭示了这些物种中独特进化的基因,这可能解释了它们的适应性。