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纹理分析中的空间评估:放射科医生需要了解的内容。

Spatial assessments in texture analysis: what the radiologist needs to know.

作者信息

Varghese Bino A, Fields Brandon K K, Hwang Darryl H, Duddalwar Vinay A, Matcuk George R, Cen Steven Y

机构信息

Department of Radiology, Keck School of Medicine, University of Southern California, Los Angeles, CA, United States.

Department of Radiology & Biomedical Imaging, University of California, San Francisco, San Francisco, CA, United States.

出版信息

Front Radiol. 2023 Aug 24;3:1240544. doi: 10.3389/fradi.2023.1240544. eCollection 2023.

Abstract

To date, studies investigating radiomics-based predictive models have tended to err on the side of data-driven or exploratory analysis of many thousands of extracted features. In particular, spatial assessments of texture have proven to be especially adept at assessing for features of intratumoral heterogeneity in oncologic imaging, which likewise may correspond with tumor biology and behavior. These spatial assessments can be generally classified as spatial filters, which detect areas of rapid change within the grayscale in order to enhance edges and/or textures within an image, or neighborhood-based methods, which quantify gray-level differences of neighboring pixels/voxels within a set distance. Given the high dimensionality of radiomics datasets, data dimensionality reduction methods have been proposed in an attempt to optimize model performance in machine learning studies; however, it should be noted that these approaches should only be applied to training data in order to avoid information leakage and model overfitting. While area under the curve of the receiver operating characteristic is perhaps the most commonly reported assessment of model performance, it is prone to overestimation when output classifications are unbalanced. In such cases, confusion matrices may be additionally reported, whereby diagnostic cut points for model predicted probability may hold more clinical significance to clinical colleagues with respect to related forms of diagnostic testing.

摘要

迄今为止,研究基于放射组学的预测模型往往倾向于对数千个提取特征进行数据驱动或探索性分析。特别是,纹理的空间评估已被证明特别擅长在肿瘤成像中评估肿瘤内异质性特征,这同样可能与肿瘤生物学和行为相关。这些空间评估通常可分为空间滤波器,其检测灰度内的快速变化区域以增强图像内的边缘和/或纹理,或基于邻域的方法,其量化在设定距离内相邻像素/体素的灰度差异。鉴于放射组学数据集的高维度,已提出数据降维方法以试图在机器学习研究中优化模型性能;然而,应当注意,这些方法仅应应用于训练数据,以避免信息泄露和模型过拟合。虽然受试者工作特征曲线下面积可能是最常报告的模型性能评估指标,但当输出分类不平衡时,它容易被高估。在这种情况下,可能会额外报告混淆矩阵,由此模型预测概率的诊断切点对于临床同事在相关诊断测试形式方面可能具有更大的临床意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2df6/10484588/6cc668727689/fradi-03-1240544-g001.jpg

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