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玉米枯草杆菌蛋白酶基因家族的系统分析以及花药特异性成员的表达与亚细胞定位研究

A systematic analysis of the subtilase gene family and expression and subcellular localization investigation of anther-specific members in maize.

作者信息

Hou Quancan, Wang Linlin, Qi Yuchen, Yan Tingwei, Zhang Fan, Zhao Wei, Wan Xiangyuan

机构信息

Research Institute of Biology and Agriculture, University of Science and Technology Beijing, Beijing, 100083, China; Beijing Engineering Laboratory of Main Crop Bio-Tech Breeding, Zhongzhi lnternational lnstitute of Agricultural Biosciences, Beijing, 100192, China.

Research Institute of Biology and Agriculture, University of Science and Technology Beijing, Beijing, 100083, China.

出版信息

Plant Physiol Biochem. 2023 Oct;203:108041. doi: 10.1016/j.plaphy.2023.108041. Epub 2023 Sep 15.

Abstract

Subtilases (SBTs), also known as Subtilisin-like serine proteases, are extracellular alkaline protease proteins. SBTs function in all stages of plant growth, development and stress responses. Maize (Zea mays L.) is a crop widely used worldwide as food, feed, and industrial materials. However, information about the members and their functions of the SBT proteins in maize is lacking. In this study, we identified 58 ZmSBT genes from the maize genome and conducted a comprehensive investigation of ZmSBTs by phylogenetic, gene duplication event, gene structure, and protein conserved motif analyses. The ZmSBT proteins were phylogenetically classified into seven groups, and collinearity analysis indicated that many ZmSBTs originate from tandem or segmental duplications. Structural and homolog protein comparison revealed ZmSBTs have conserved protein structures with reported subtilase proteins, suggesting the conserved functions. Further analysis showed that ZmSBTs are expressed in different tissues, and many are responses to specific abiotic stress. Analysis of the anther-specific ZmSBT genes showed their expression peaked at different developmental stages of maize anthers. Subcellular localization analysis of selected maize ZmSBTs showed they are located in different cellular compartments. The information provided in this study is valuable for further functional study of ZmSBTs.

摘要

枯草杆菌蛋白酶(SBTs),也被称为类枯草杆菌蛋白酶丝氨酸蛋白酶,是细胞外碱性蛋白酶蛋白。SBTs在植物生长、发育和应激反应的所有阶段发挥作用。玉米(Zea mays L.)是一种在全球广泛用作食物、饲料和工业原料的作物。然而,关于玉米中SBT蛋白的成员及其功能的信息却很缺乏。在本研究中,我们从玉米基因组中鉴定出58个ZmSBT基因,并通过系统发育、基因复制事件、基因结构和蛋白质保守基序分析对ZmSBTs进行了全面研究。ZmSBT蛋白在系统发育上被分为七组,共线性分析表明许多ZmSBTs起源于串联或片段重复。结构和同源蛋白比较显示ZmSBTs与已报道的枯草杆菌蛋白酶蛋白具有保守的蛋白质结构,表明其功能保守。进一步分析表明,ZmSBTs在不同组织中表达,许多对特定的非生物胁迫有反应。对花药特异性ZmSBT基因的分析表明,它们在玉米花药的不同发育阶段表达达到峰值。对选定的玉米ZmSBTs进行亚细胞定位分析表明,它们位于不同的细胞区室中。本研究提供的信息对于进一步研究ZmSBTs的功能具有重要价值。

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