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对感染气单胞菌的噬菌体 AHPMCC7 的全基因组序列分析,一种新型 Ahphunavirus 属及其在凡纳滨对虾养殖中的应用。

Whole genome sequence analysis of Aeromonas-infecting bacteriophage AHPMCC7, a new species of genus Ahphunavirus and its application in Litopenaeus vannamei culture.

机构信息

Department of Biological Sciences, Midnapore City College, Midnapore, West Bengal, India; Biodiversity and Environmental Studies Research Center, Midnapore City College affiliated to Vidyasagar University, Midnapore, West Bengal, India.

Department of Biological Sciences, Midnapore City College, Midnapore, West Bengal, India.

出版信息

Virology. 2023 Nov;588:109887. doi: 10.1016/j.virol.2023.109887. Epub 2023 Sep 21.

Abstract

Aeromonas hydrophila, a Gram-negative pathogenic bacterium, is responsible for huge economic losses in aquaculture. In this study, we evaluated the efficacy of bacteriophage AHPMCC7 which was isolated by using A. hydrophila MTCC 1739 as a host. This bacteriophage exhibited 10 min latent period and burst size was 275. In liquid culture, bacteriophage AHPMCC7 could completely lyse A. hydrophila MTCC 1739 after 2 h. AHPMCC7 genome was 42,277 bp long with 58.9% G + C content. The genome consisted of 48 CDSs and no tRNA. The comparative genomic analyses clearly implied that AHPMCC7 might represent a novel species of the genus Aphunavirus under Autographiviridae family. Bacteriophage AHPMCC7 could survive at broad pH (3-10), temperature (4-37 °C), and salinity (0-40 ppt). In aquarium trial, AHPMCC7 could control A. hydrophila MTCC 1739 without affecting the survivability of Litopenaeus vannamei. Clearly, the bacteriophage AHPMCC7 might be used in shrimp aquaculture as a biocontrol agent.

摘要

嗜水气单胞菌是一种革兰氏阴性的致病性细菌,是水产养殖中造成巨大经济损失的原因之一。在本研究中,我们评估了噬菌体 AHPMCC7 的功效,该噬菌体是使用嗜水气单胞菌 MTCC 1739 作为宿主分离得到的。该噬菌体潜伏期为 10 分钟,爆发量为 275。在液体培养中,噬菌体 AHPMCC7 在 2 小时后可完全裂解嗜水气单胞菌 MTCC 1739。AHPMCC7 基因组长 42277bp,G+C 含量为 58.9%。基因组由 48 个 CDS 和无 tRNA 组成。比较基因组分析清楚地表明,AHPMCC7 可能代表了 Autographiviridae 科 Aphunavirus 属的一个新种。噬菌体 AHPMCC7 可在宽 pH(3-10)、温度(4-37°C)和盐度(0-40ppt)条件下存活。在水族馆试验中,噬菌体 AHPMCC7 可控制嗜水气单胞菌 MTCC 1739,而不影响凡纳滨对虾的存活率。显然,噬菌体 AHPMCC7 可作为一种生物防治剂用于虾类养殖。

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