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基于影像组学和语义特征的列线图在预测异柠檬酸脱氢酶(IDH)野生型组织学低级别胶质瘤中7号染色体获得/10号染色体缺失方面的开发

Development of a nomogram based on radiomics and semantic features for predicting chromosome 7 gain/chromosome 10 loss in IDH wild-type histologically low-grade gliomas.

作者信息

Kong Xin, Mao Yu, Xi Fengjun, Li Yan, Luo Yuqi, Ma Jun

机构信息

Department of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.

Department of Radiology, Beijing Fengtai Hospital, Beijing, China.

出版信息

Front Oncol. 2023 Sep 15;13:1196614. doi: 10.3389/fonc.2023.1196614. eCollection 2023.

DOI:10.3389/fonc.2023.1196614
PMID:37781185
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10541227/
Abstract

PURPOSE

To predict chromosome 7 gain and chromosome 10 loss (+7/-10) in IDH wild-type (IDH-wt) histologically low-grade gliomas (LGG) by machine learning models based on MRI radiomics and semantic features.

METHODS

A total of 122 patients diagnosed as IDH-wt histologically LGG were retrospectively included in this study. The patients were randomly divided into a training group and a test group in a ratio of 7:3. The radiomics features were extracted from axial T1WI, T2WI, FLAIR and CET1 sequences, respectively. The distance correlation (DC) and least absolute shrinkage and selection operator (LASSO) were used to select the radiomics signatures. Three machine learning algorithms including neural network (NN), support vector machine (SVM), and linear discriminant analysis (LDA) were used to construct radiomics models. In addition, a nomogram was developed by combining the optimal radiomics signature with clinical risk factors, and the potential clinical utility of the nomogram was evaluated using decision curve analysis.

RESULTS

The LDA+DC model was identified as the optimal classifier among the six radiomics models. Necrosis was determined as a risk factor for +7/-10 in IDH-wt histologically LGG. The nomogram achieved the best performance, with an AUC of 0.854 and an accuracy of 0.778 in the independent test group. The decision curve of the nomogram confirmed its clinical usefulness in a wide range of thresholds.

CONCLUSION

The nomogram combining radiomics and semantic features can predict the +7/-10 status effectively, which may contribute to the risk stratification and individualized treatment planning of patients with IDH-wt histologically LGG.

摘要

目的

通过基于MRI放射组学和语义特征的机器学习模型,预测异柠檬酸脱氢酶野生型(IDH-wt)组织学低级别胶质瘤(LGG)中的7号染色体增益和10号染色体缺失(+7/-10)。

方法

本研究回顾性纳入了122例被诊断为IDH-wt组织学LGG的患者。患者以7:3的比例随机分为训练组和测试组。分别从轴向T1WI、T2WI、FLAIR和CET1序列中提取放射组学特征。使用距离相关性(DC)和最小绝对收缩和选择算子(LASSO)来选择放射组学特征。使用包括神经网络(NN)、支持向量机(SVM)和线性判别分析(LDA)在内的三种机器学习算法来构建放射组学模型。此外,通过将最佳放射组学特征与临床风险因素相结合开发了列线图,并使用决策曲线分析评估了列线图的潜在临床效用。

结果

LDA+DC模型被确定为六个放射组学模型中的最佳分类器。坏死被确定为IDH-wt组织学LGG中+7/-10的危险因素。列线图表现最佳,在独立测试组中的AUC为0.854,准确率为0.778。列线图的决策曲线证实了其在广泛阈值范围内的临床实用性。

结论

结合放射组学和语义特征的列线图可以有效预测+7/-10状态,这可能有助于IDH-wt组织学LGG患者的风险分层和个体化治疗规划。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/7cb0eabab4c1/fonc-13-1196614-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/05fa41d58d27/fonc-13-1196614-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/495eb1014e63/fonc-13-1196614-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/24b494397fde/fonc-13-1196614-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/111e6dd08dfe/fonc-13-1196614-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/7ed33b496e47/fonc-13-1196614-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/c54775af7ef8/fonc-13-1196614-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/1f8ac58922a6/fonc-13-1196614-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/368a3d2dd3c7/fonc-13-1196614-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/7cb0eabab4c1/fonc-13-1196614-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/05fa41d58d27/fonc-13-1196614-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/495eb1014e63/fonc-13-1196614-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/24b494397fde/fonc-13-1196614-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/111e6dd08dfe/fonc-13-1196614-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/7ed33b496e47/fonc-13-1196614-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/c54775af7ef8/fonc-13-1196614-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/1f8ac58922a6/fonc-13-1196614-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/368a3d2dd3c7/fonc-13-1196614-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3085/10541227/7cb0eabab4c1/fonc-13-1196614-g009.jpg

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