Biostructural Mechanism Laboratory, RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan; Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577, Japan.
Biostructural Mechanism Laboratory, RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan; Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577, Japan.
Structure. 2023 Nov 2;31(11):1328-1334. doi: 10.1016/j.str.2023.09.007. Epub 2023 Oct 4.
Three-dimensional electron diffraction (3D ED) is a measurement and analysis technique in transmission electron microscopy that is used for determining atomic structures from small crystals. Diverse targets such as proteins, polypeptides, and organic compounds, whose crystals exist in aqueous solutions and organic solvents, or as dried powders, can be studied with 3D ED. We have been involved in the development of this technique, which can now rapidly process a large number of data collected through AI control, enabling efficient structure determination. Here, we introduce this method and describe our recent results. These include the structures and pathogenic mechanisms of wild-type and mutant polypeptides associated with the debilitating disease amyotrophic lateral sclerosis (ALS), the double helical structure of nanographene promoting nanofiber formation, and the structural properties of an organic semiconductor containing disordered regions. We also discuss the limitations and prospects of 3D ED compared to microcrystallography with X-ray free electron lasers.
三维电子衍射(3D ED)是一种在透射电子显微镜中使用的测量和分析技术,用于从小晶体中确定原子结构。可以用 3D ED 研究各种目标,如蛋白质、多肽和有机化合物,其晶体存在于水溶液和有机溶剂中,或作为干燥粉末。我们一直参与这项技术的开发,该技术现在可以通过人工智能控制快速处理大量收集的数据,从而实现高效的结构确定。在这里,我们介绍这种方法并描述我们的最新结果。这些结果包括与使人衰弱的疾病肌萎缩性侧索硬化症(ALS)相关的野生型和突变型多肽的结构和致病机制、纳米石墨烯的双螺旋结构促进纳米纤维形成,以及含有无序区域的有机半导体的结构特性。我们还讨论了与使用自由电子激光的微晶体学相比,3D ED 的局限性和前景。