Bailey Nicholas P, Shao Yuxin, Du Shaodua, Foster Peter G, Fettweis Jennifer, Hall Neil, Wang Zheng, Hirt Robert P
Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, United Kingdom.
Institute of Animal Husbandry and Veterinary Medicine, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
Front Microbiol. 2023 Sep 20;14:1242275. doi: 10.3389/fmicb.2023.1242275. eCollection 2023.
The protozoan parasite is the most common cellular sexually transmitted disease in humans, and the closely related species is an avian parasite of ecological and economic importance. Phylogenetic evidence suggests arose during bird to human transmission of a -like ancestor. shares a strong clinical association with the independent sexually transmitted pathogen (formerly ) , and the uncultured bacterium " Malacoplasma (formerly ) girerdii," with the latter association being an order of magnitude stronger. Both bacterial species have been shown to profoundly influence growth, energy production and virulence-associated mechanisms.
Evidence for a novel sp. was discovered by Illumina metatranscriptomics sequencing of the -infected pigeon mouth. We leveraged published 16S rDNA profiling data from digestive tract of 12 healthy and 24 -infected pigeons to investigate association between the novel sp. and . We utilised Illumina metagenomics sequencing targeted to pigeon oral and crop samples infected with the novel sp. to generate its full-length genome sequence. Sequence similarity network analysis was used to compare annotated proteins from the novel sp. with a range of other related species.
Here we present evidence for a novel species, related to " M. girerdii," that is strongly associated with in the upper digestive tract of domestic pigeons. Analysis of the genome sequence revealed gene features apparently specific to a -symbiotic lineage.
These data support a model of long-term association between and spp. that has been conserved across diversification of the lineage and the host species barrier from birds to human.
原生动物寄生虫是人类最常见的细胞性传播疾病,与之密切相关的物种是一种具有生态和经济重要性的禽类寄生虫。系统发育证据表明,它是在类似 的祖先从鸟类传播到人类的过程中产生的。它与独立的性传播病原体(以前称为 )有很强的临床关联,并且与未培养的细菌“柔膜体(以前称为 )吉勒迪氏菌”有更强的关联,后者的关联强度要高一个数量级。这两种细菌都已被证明会深刻影响 的生长、能量产生和与毒力相关的机制。
通过对感染 的鸽子口腔进行Illumina宏转录组测序,发现了一种新型 菌的证据。我们利用已发表的来自12只健康鸽子和24只感染 的鸽子消化道的16S rDNA分析数据,来研究这种新型 菌与 之间的关联。我们利用针对感染了这种新型 菌的鸽子口腔和嗉囊样本的Illumina宏基因组测序来生成其全长基因组序列。序列相似性网络分析用于将这种新型 菌的注释蛋白与一系列其他相关物种进行比较。
在这里,我们提供了一种与“吉勒迪氏柔膜体”相关的新型 菌的证据,它与家鸽上消化道中的 密切相关。对基因组序列的分析揭示了一些显然特定于 共生谱系的基因特征。
这些数据支持了一种 与 菌属之间长期关联的模型,这种关联在 谱系的多样化以及从鸟类到人类的宿主物种屏障中都得以保留。