School of Biological Sciences, University of Auckland, Auckland, New Zealand.
Department of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Int J Syst Evol Microbiol. 2023 Oct;73(10). doi: 10.1099/ijsem.0.006100.
A Gram-stain-negative, non-spore-forming, rod-shaped, obligately anaerobic bacterium, designated strain BP5G, was isolated from the hindgut of a silver drummer () fish collected from the Hauraki Gulf, New Zealand. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that the isolate belonged to the family in the phylum and was most closely related to with 94.06 % sequence identity. Isolate BP5G grew on agar medium containing mannitol and fish gut fluid as carbon sources. Clear colonies of approximately 1 mm diameter of the isolate grew within a week at 20-28 °C (optimum, 28 °C) and pH 7.6-8.5 (optimum, pH 8.5). Strain BP5G was very sensitive to NaCl and the optimal concentration for growth was 0.045 % (w/v). Acetate and propionate were the major fermentation products. The major cellular fatty acids were C, C, C and C. The genome sequence of the isolate was determined. Its G+C content was 38.41 mol% and the 71.41 % average nucleotide identity of the BP5G genome to its closest neighbour with a sequenced genome ( DSM 1682) indicated low genomic relatedness. Based on the phenotypic and taxonomic characteristics observed in this study, a novel genus and species named gen. nov., sp. nov. is proposed for isolate BP5G (=ICMP 24687=JCM 35769).
一株革兰氏阴性、不产芽孢、杆状、严格厌氧菌,命名为 BP5G 菌株,从新西兰豪拉基湾采集的银鼓鱼的后肠中分离得到。基于 16S rRNA 基因序列的系统发育分析表明,该分离株属于 科,在 门中与 最为密切相关,序列同一性为 94.06%。分离株 BP5G 在含有甘露醇和鱼肠液作为碳源的琼脂培养基上生长。在 20-28°C(最佳温度为 28°C)和 pH 7.6-8.5(最佳 pH 为 8.5)下,约 1mm 直径的清晰菌落可在一周内生长。BP5G 菌株对 NaCl 非常敏感,最佳生长浓度为 0.045%(w/v)。乙酸盐和丙酸盐是主要的发酵产物。主要细胞脂肪酸为 C、C、C 和 C。分离株的基因组序列已被确定。其 G+C 含量为 38.41 mol%,与具有测序基因组的最接近邻菌(DSM 1682)的 BP5G 基因组的 71.41%平均核苷酸同一性表明其基因组相关性较低。根据本研究中观察到的表型和分类特征,建议将分离株 BP5G(=ICMP 24687=JCM 35769)命名为一个新属和新种,命名为 属,新种。