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未来已来:揭示人类(坏死)微生物群在法医调查中不断扩大的潜力。

The Future Is Now: Unraveling the Expanding Potential of Human (Necro)Microbiome in Forensic Investigations.

作者信息

Cláudia-Ferreira Ana, Barbosa Daniel José, Saegeman Veroniek, Fernández-Rodríguez Amparo, Dinis-Oliveira Ricardo Jorge, Freitas Ana R

机构信息

1H-TOXRUN, One Health Toxicology Research Unit, University Institute of Health Sciences (IUCS), CESPU, CRL, 4585-116 Gandra, Portugal.

Instituto de Investigação e Inovação em Saúde (i3S), Universidade do Porto, 4200-135 Porto, Portugal.

出版信息

Microorganisms. 2023 Oct 7;11(10):2509. doi: 10.3390/microorganisms11102509.

Abstract

The relevance of microbiological examinations has been controversial for decades, but the boom in advanced sequencing techniques over the last decade is increasingly demonstrating their usefulness, namely for the estimation of the interval. This comprehensive review aims to present the current knowledge about the human microbiome (the necrobiome), highlighting the main factors influencing this complex process and discussing the principal applications in the field of forensic sciences. Several limitations still hindering the implementation of forensic microbiology, such as small-scale studies, the lack of a universal/harmonized workflow for DNA extraction and sequencing technology, variability in the human microbiome, and limited access to human cadavers, are discussed. Future research in the field should focus on identifying stable biomarkers within the dominant Bacillota and Pseudomonadota phyla, which are prevalent during periods and for which standardization, method consolidation, and establishment of a forensic microbial bank are crucial for consistency and comparability. Given the complexity of identifying unique microbial signatures for robust databases, a promising future approach may involve deepening our understanding of specific bacterial species/strains that can serve as reliable interval indicators during the process of body decomposition. Microorganisms might have the potential to complement routine forensic tests in judicial processes, requiring robust investigations and machine-learning models to bridge knowledge gaps and adhere to Locard's principle of trace evidence.

摘要

几十年来,微生物学检查的相关性一直存在争议,但在过去十年中,先进测序技术的蓬勃发展越来越证明了它们的实用性,即用于估计死亡时间间隔。这篇综述旨在介绍当前关于人类微生物组(死后微生物组)的知识,强调影响这一复杂过程的主要因素,并讨论其在法医学领域的主要应用。文中还讨论了目前仍阻碍法医微生物学应用的几个限制因素,如小规模研究、缺乏用于DNA提取和测序技术的通用/统一工作流程、人类微生物组的变异性以及获取人类尸体的机会有限等。该领域未来的研究应集中在确定厚壁菌门和假单胞菌门中在死亡期间普遍存在的稳定生物标志物,对于这些生物标志物,标准化、方法整合以及建立法医微生物库对于一致性和可比性至关重要。鉴于为强大的数据库识别独特微生物特征的复杂性,未来一种有前景的方法可能是加深我们对特定细菌物种/菌株的理解,这些细菌物种/菌株在尸体分解过程中可作为可靠的死亡时间间隔指标。微生物可能有潜力在司法程序中补充常规法医检验,这需要深入的调查和机器学习模型来填补知识空白并遵循洛卡德物质交换原理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cadd/10608847/61264a85fa4a/microorganisms-11-02509-g002.jpg

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