• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

日本云仙天蚕的线粒体基因组全序列特征及系统发育分析。

Characterization and Phylogenetic Analysis of the Complete Mitochondrial Genome of Saturnia japonica.

机构信息

School of Life Sciences, Anhui Agricultural University, Hefei, 230036, People's Republic of China.

Sericultural Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230061, People's Republic of China.

出版信息

Biochem Genet. 2022 Jun;60(3):914-936. doi: 10.1007/s10528-021-10129-9. Epub 2021 Sep 22.

DOI:10.1007/s10528-021-10129-9
PMID:34553327
Abstract

The complete mitochondrial genome (mitogenome) of Saturnia japonica (Lepidoptera: Saturniidae) was sequenced and annotated. It is a circular molecule of 15, 376 bp, composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNA), and an adenine (A) + thymine (T)-rich region. All protein-coding genes (PCGs) are initiated by the ATN codon except for cytochrome c oxidase subunit 1 (cox1) gene that is seemingly initiated by the CGA codon. Except for cox2 and nad4, which were terminated by incomplete stop codon T or TA, the rest were terminated by canonical stop codon TAA. The A + T-rich region is high conservative, including 'ATAGA' motif followed by a 19 bp poly-T stretch, a microsatellite-like element (AT) and also a poly-A element, with a total length of 332 bp. The Asn codon was the most frequently used codon, followed by Ile, Leu2, Lys, Met, Phe, and Tyr, while Cys was the least frequently used codon. Phylogenetic relationships analysis based on the 13 PCGs by using maximum likelihood (ML) and neighbor Joining (NJ) revealed that S. japonica belongs to the Saturniidae family. In this study, the annotation and characteristics of the mitogenome of S. japonica were resolved for the first time, which laid a foundation for species classification and the molecular evolution of Lepidoptera: Saturniidae.

摘要

圆斑蝾螈(Lepidoptera: Saturniidae)的完整线粒体基因组(mitogenome)已被测序和注释。它是一个 15376bp 的圆形分子,由 13 个蛋白质编码基因(PCGs)、22 个转移 RNA 基因(tRNAs)、两个核糖体 RNA 基因(rRNA)和一个富含腺嘌呤(A)+胸腺嘧啶(T)的区域组成。除细胞色素 c 氧化酶亚基 1(cox1)基因似乎以 CGA 密码子起始外,所有蛋白质编码基因(PCGs)均以 ATN 密码子起始。除 cox2 和 nad4 外,其余基因均以典型的终止密码子 TAA 终止,cox2 和 nad4 分别以不完全终止密码子 T 或 TA 终止。A+T 丰富区高度保守,包括“ATAGA”基序,其后是 19bp 的聚 T 延伸、微卫星样元件(AT)和多 A 元件,总长度为 332bp。天冬酰胺(Asn)密码子是使用最频繁的密码子,其次是异亮氨酸(Ile)、亮氨酸 2(Leu2)、赖氨酸(Lys)、蛋氨酸(Met)、苯丙氨酸(Phe)和酪氨酸(Tyr),而半胱氨酸(Cys)是使用最不频繁的密码子。基于最大似然法(ML)和邻接法(NJ)对 13 个 PCGs 的系统发育关系分析表明,圆斑蝾螈属于 Saturniidae 科。本研究首次解析了圆斑蝾螈线粒体基因组的注释和特征,为鳞翅目:Saturniidae 的物种分类和分子进化奠定了基础。

相似文献

1
Characterization and Phylogenetic Analysis of the Complete Mitochondrial Genome of Saturnia japonica.日本云仙天蚕的线粒体基因组全序列特征及系统发育分析。
Biochem Genet. 2022 Jun;60(3):914-936. doi: 10.1007/s10528-021-10129-9. Epub 2021 Sep 22.
2
Comparative mitochondrial genome analysis of Daphnis nerii and other lepidopteran insects reveals conserved mitochondrial genome organization and phylogenetic relationships.烟草天蛾与其他鳞翅目昆虫的线粒体基因组比较分析揭示了保守的线粒体基因组组织和系统发育关系。
PLoS One. 2017 Jun 9;12(6):e0178773. doi: 10.1371/journal.pone.0178773. eCollection 2017.
3
Characterization of the Complete Mitochondrial Genome of Cerura menciana and Comparison with Other Lepidopteran Insects.柳毒蛾线粒体全基因组特征分析及其与其他鳞翅目昆虫的比较
PLoS One. 2015 Aug 26;10(8):e0132951. doi: 10.1371/journal.pone.0132951. eCollection 2015.
4
Characterization of the Complete Mitochondrial Genome of Leucoma salicis (Lepidoptera: Lymantriidae) and Comparison with Other Lepidopteran Insects.柳毒蛾线粒体基因组全序列特征及其与其他鳞翅目昆虫的比较分析
Sci Rep. 2016 Dec 15;6:39153. doi: 10.1038/srep39153.
5
Characterization of the complete mitochondrial genome of Orthaga olivacea Warre (Lepidoptera Pyralidae) and comparison with other Lepidopteran insects.橄榄菜粉蝶(鳞翅目:麦蛾科)线粒体基因组全序列特征及其与其他鳞翅目昆虫的比较。
PLoS One. 2020 Mar 6;15(3):e0227831. doi: 10.1371/journal.pone.0227831. eCollection 2020.
6
Characterization of the complete mitochondrial genome of Tryporyza incertulas, in comparison with seven other Pyraloidea moths.试译:与其他 7 种鳞翅目昆虫比较,鉴定未明麦蛾的完整线粒体基因组。
Gene. 2014 Jan 1;533(1):356-65. doi: 10.1016/j.gene.2013.07.072. Epub 2013 Aug 15.
7
Mitochondrial genome of the sweet potato hornworm, Agrius convolvuli (Lepidoptera: Sphingidae), and comparison with other Lepidoptera species.甘薯天蛾(Agrius convolvuli,鳞翅目:天蛾科)的线粒体基因组及其与其他鳞翅目物种的比较。
Genome. 2017 Feb;60(2):128-138. doi: 10.1139/gen-2016-0058. Epub 2016 Oct 21.
8
Mitochondrial genome of (Lepidoptera: Geometridae) and comparative analysis with other Lepidopterans.(鳞翅目:尺蛾科)的线粒体基因组及其与其他鳞翅目昆虫的比较分析
Zootaxa. 2017 Apr 20;4254(5):501-519. doi: 10.11646/zootaxa.4254.5.1.
9
The Complete Mitochondrial Genome of the Beet Webworm, Spoladea recurvalis (Lepidoptera: Crambidae) and Its Phylogenetic Implications.甜菜夜蛾(鳞翅目:草螟科)线粒体全基因组及其系统发育意义
PLoS One. 2015 Jun 19;10(6):e0129355. doi: 10.1371/journal.pone.0129355. eCollection 2015.
10
The complete mitochondrial genome of Antheraea pernyi strain Yu6 (Lepidoptera: Saturniidae).柞蚕豫6品系(鳞翅目:大蚕蛾科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4228-4229. doi: 10.3109/19401736.2015.1022753. Epub 2015 May 4.

引用本文的文献

1
Unfolding the mitochondrial genome structure of green semilooper (Chrysodeixis acuta Walker): An emerging pest of onion (Allium cepa L.).解析葱(Allium cepa L.)新害虫——绿叶蝉(Chrysodeixis acuta Walker)的线粒体基因组结构。
PLoS One. 2022 Aug 30;17(8):e0273635. doi: 10.1371/journal.pone.0273635. eCollection 2022.
2
Mitogenomics and phylogenetics of twelve species of African Saturniidae (Lepidoptera).十二种非洲大蚕蛾科(鳞翅目)的线粒体基因组学和系统发育学。
PeerJ. 2022 Apr 18;10:e13275. doi: 10.7717/peerj.13275. eCollection 2022.

本文引用的文献

1
Babesia gibsoni endemic to Wuhan, China: mitochondrial genome sequencing, annotation, and comparison with apicomplexan parasites.吉氏巴贝斯虫在中国武汉地方流行:线粒体基因组测序、注释及与顶复门寄生虫的比较
Parasitol Res. 2019 Jan;118(1):235-243. doi: 10.1007/s00436-018-6158-2. Epub 2018 Nov 24.
2
Mitochondrial genome characterization of Tecia solanivora (Lepidoptera: Gelechiidae) and its phylogenetic relationship with other lepidopteran insects.茄潜叶蛾(鳞翅目:麦蛾科)的线粒体基因组特征及其与其他鳞翅目昆虫的系统发育关系
Gene. 2016 May 1;581(2):107-16. doi: 10.1016/j.gene.2016.01.031. Epub 2016 Jan 21.
3
Saturnia jonasii Butler, 1877 on Jejudo Island, a new saturnid moth of South Korea with DNA data and morphology (Lepidoptera: Saturniidae).
1877年巴特勒所定的乔纳斯巨蚕蛾,位于济州岛,韩国一种新的大蚕蛾,含DNA数据及形态学研究(鳞翅目:大蚕蛾科)
Zootaxa. 2015 Apr 10;3946(3):374-86. doi: 10.11646/zootaxa.3946.3.5.
4
The mitochondrial genome of Dastarcus helophoroides (Coleoptera: Bothrideridae) and related phylogenetic analyses.黑胫钩土甲(鞘翅目:方胸甲科)线粒体基因组及相关系统发育分析
Gene. 2015 Apr 10;560(1):15-24. doi: 10.1016/j.gene.2014.12.026. Epub 2014 Dec 15.
5
The complete mitogenome of Apocheima cinerarius (Lepidoptera: Geometridae: Ennominae) and comparison with that of other lepidopteran insects.枯叶蛾科(鳞翅目:尺蛾总科:枝尺蛾科)的 Apocheima cinerarius 的完整线粒体基因组及其与其他鳞翅目昆虫的比较。
Gene. 2014 Aug 15;547(1):136-44. doi: 10.1016/j.gene.2014.06.044. Epub 2014 Jun 24.
6
Insect mitochondrial genomics: implications for evolution and phylogeny.昆虫线粒体基因组学:对进化和系统发育的启示。
Annu Rev Entomol. 2014;59:95-117. doi: 10.1146/annurev-ento-011613-162007. Epub 2013 Oct 16.
7
Characterization of the complete mitochondrial genome of Diaphania pyloalis (Lepidoptera: Pyralididae).描述金裳凤蝶(鳞翅目:凤蝶科)的完整线粒体基因组。
Gene. 2013 Sep 15;527(1):283-91. doi: 10.1016/j.gene.2013.06.035. Epub 2013 Jun 26.
8
Characterization of the mitochondrial genome of the diamondback moth Plutella xylostella (Lepidoptera: Plutellidae) and phylogenetic analysis of advanced moths and butterflies.菜粉蝶线粒体基因组的特征及其与先进蛾蝶类的系统发育分析。
DNA Cell Biol. 2013 Apr;32(4):173-87. doi: 10.1089/dna.2012.1942. Epub 2013 Mar 15.
9
The complete mitogenome of Bombyx mori strain Dazao (Lepidoptera: Bombycidae) and comparison with other lepidopteran insects.大造家蚕(鳞翅目:天蚕科)的完整线粒体基因组序列与其他鳞翅目昆虫的比较。
Genomics. 2013 Jan;101(1):64-73. doi: 10.1016/j.ygeno.2012.10.002. Epub 2012 Oct 13.
10
The complete mitochondrial genome of Leucoptera malifoliella Costa (Lepidoptera: Lyonetiidae).丽夜蛾属 Leucoptera malifoliella Costa 的完整线粒体基因组(鳞翅目:灯蛾科)。
DNA Cell Biol. 2012 Oct;31(10):1508-22. doi: 10.1089/dna.2012.1642. Epub 2012 Aug 2.