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拟南芥 NAC 转录因子家族的全基因组特征及其对干旱胁迫的响应。

Comprehensive genomic characterisation of the NAC transcription factor family and its response to drought stress in .

机构信息

Laboratory of Forestry Department, Agricultural College, Shihezi University, Shihezi, China.

Lveyang County Forest Tree Seedling Workstation, Forestry Bureau of Lveyang County, Lveyang, China.

出版信息

PeerJ. 2023 Oct 23;11:e16298. doi: 10.7717/peerj.16298. eCollection 2023.

Abstract

The NAC transcription factor family enhances plant adaptation to environmental challenges by participating in signalling pathways triggered by abiotic stressors and hormonal cues. We identified 69 genes in the genome and renamed them according to their chromosomal distribution. These EuNAC proteins were clustered into 13 sub-families and distributed on 16 chromosomes and 2 scaffolds. The gene structures suggested that the number of exons varied from two to eight among these , with a multitude of them containing three exons. Duplicated events resulted in a large gene family; 12 and four pairs of were the result of segmental and tandem duplicates, respectively. The drought-stress response pattern of 12 putative was observed under drought treatment, revealing that these could play crucial roles in mitigating the effects of drought stress responses and serve as promising candidate genes for genetic engineering aimed at enhancing the drought stress tolerance of . This study provides insight into the evolution, diversity, and characterisation of genes in and will be helpful for future characterisation of putative associated with water deficit.

摘要

NAC 转录因子家族通过参与由非生物胁迫和激素信号触发的信号通路,增强植物对环境挑战的适应能力。我们在 基因组中鉴定了 69 个基因,并根据其染色体分布重新命名。这些 EuNAC 蛋白被聚类为 13 个亚家族,分布在 16 条染色体和 2 个支架上。基因结构表明,这些基因的外显子数量从两个到八个不等,其中许多含有三个外显子。重复事件导致了一个庞大的基因家族;12 对和 4 对分别是片段和串联重复的结果。在干旱处理下观察到 12 个推定 的干旱胁迫反应模式,表明这些 可能在减轻干旱胁迫反应的影响方面发挥关键作用,并且可以作为增强 耐旱性的遗传工程的有前途的候选基因。本研究深入了解了 中 基因的进化、多样性和特征,这将有助于未来对与水分亏缺相关的假定 进行特征分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b11a/10601904/46ae4552eabd/peerj-11-16298-g001.jpg

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