Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Framlington Place, NE2 4HH, Newcastle upon Tyne, UK.
Institut Pasteur, Université de Paris Cité, Unit Evolutionary Biology of the Microbial Cell, Paris, France.
Nat Commun. 2023 Nov 6;14(1):7152. doi: 10.1038/s41467-023-42601-y.
The outer membrane (OM) in diderm, or Gram-negative, bacteria must be tethered to peptidoglycan for mechanical stability and to maintain cell morphology. Most diderm phyla from the Terrabacteria group have recently been shown to lack well-characterised OM attachment systems, but instead have OmpM, which could represent an ancestral tethering system in bacteria. Here, we have determined the structure of the most abundant OmpM protein from Veillonella parvula (diderm Firmicutes) by single particle cryogenic electron microscopy. We also characterised the channel properties of the transmembrane β-barrel of OmpM and investigated the structure and PG-binding properties of its periplasmic stalk region. Our results show that OM tethering and nutrient acquisition are genetically linked in V. parvula, and probably other diderm Terrabacteria. This dual function of OmpM may have played a role in the loss of the OM in ancestral bacteria and the emergence of monoderm bacterial lineages.
双层(或革兰氏阴性)细菌的外膜(OM)必须与肽聚糖相连,以保持机械稳定性和维持细胞形态。最近已经表明,大多数来自 Terrabacteria 组的双层细菌门缺乏特征明确的 OM 附着系统,但它们确实具有 OmpM,这可能代表了细菌中一种古老的连接系统。在这里,我们通过单颗粒低温电子显微镜确定了来自小韦荣球菌(双层厚壁菌)的最丰富的 OmpM 蛋白的结构。我们还描述了 OmpM 的跨膜β桶的通道特性,并研究了其周质柄区的结构和 PG 结合特性。我们的结果表明,OM 连接和营养物质获取在小韦荣球菌中是遗传相关的,可能在其他双层 Terrabacteria 中也是如此。OmpM 的这种双重功能可能在祖先细菌中 OM 的丧失以及单壁细菌谱系的出现中发挥了作用。