Zhu Chenjing, Wu Jianfeng, Shelat Vishal G, Sayagués José María, Yamamoto Seiichiro, Yang Li, He Xia
Department of Radiation Oncology, Jiangsu Cancer Hospital & Jiangsu Institute of Cancer Research & Affiliated Cancer Hospital of Nanjing Medical University, Nanjing Medical University Affiliated Cancer Hospital, Nanjing, China.
Department of General Surgery, Tan Tock Seng Hospital, Singapore, Singapore.
J Gastrointest Oncol. 2023 Oct 31;14(5):2146-2157. doi: 10.21037/jgo-23-641. Epub 2023 Oct 24.
Transmembrane serine protease 2 (TMPRSS2) mediates the entry of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) into host cells. The relevant research indicates the intestine to be a target of SARS-CoV-2 infection, and thus we aimed to investigate the correlation between expression and the prognosis, molecular features, and immunotherapy response in patients with colorectal cancer (CRC).
The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases were used in this study and a total of 1,385 patients were identified. The CIBERSORT algorithms were used to evaluate the relative infiltration levels of immune cell types in the tumor microenvironment (TME). The correlation between expression and immunotherapy response rate was assessed in another 2 independent cohorts.
expression was significantly downregulated in cancer tissue compared to the adjacent normal tissue, and patients with CRC with lower expression showed notably poorer prognosis. Functional enrichment analysis found that low expression was significantly associated with cancer metastasis-related pathways. Further analysis based on the miRWalk tool and JASPAR database identified a list of microRNAs (miRNAs) and transcriptional factors targeting . Distinct differences in immune cell infiltration and tumor purity reflected by estimate and mutant-allele tumor heterogeneity score were observed between patients with low and high expression levels. Interestingly, patients with a low expression level showed a higher response rate to immunotherapy.
CRC cells may be more resistant to SARS-CoV-2 infection due to the decreased expression of , which could be a newly identified biomarker for prognosis and immunotherapy response prediction in patients with CRC.
跨膜丝氨酸蛋白酶2(TMPRSS2)介导严重急性呼吸综合征冠状病毒2(SARS-CoV-2)进入宿主细胞。相关研究表明肠道是SARS-CoV-2感染的一个靶点,因此我们旨在研究其在结直肠癌(CRC)患者中的表达与预后、分子特征及免疫治疗反应之间的相关性。
本研究使用了癌症基因组图谱(TCGA)和基因表达综合数据库(GEO),共纳入1385例患者。采用CIBERSORT算法评估肿瘤微环境(TME)中免疫细胞类型的相对浸润水平。在另外2个独立队列中评估其表达与免疫治疗反应率之间的相关性。
与相邻正常组织相比,癌组织中的表达显著下调,且表达较低的CRC患者预后明显较差。功能富集分析发现低表达与癌症转移相关通路显著相关。基于miRWalk工具和JASPAR数据库的进一步分析确定了一系列靶向的 microRNA(miRNA)和转录因子。在低表达和高表达水平的患者之间,通过估计值和突变等位基因肿瘤异质性评分反映出免疫细胞浸润和肿瘤纯度存在明显差异。有趣的是,低表达水平的患者对免疫治疗的反应率较高。
由于表达降低,CRC细胞可能对SARS-CoV-2感染更具抗性,这可能是一种新发现的用于预测CRC患者预后和免疫治疗反应的生物标志物。