MRC-University of Glasgow Centre for Virus Research, University of Glasgow, Glasgow, United Kingdom.
Cambridge Institute of Therapeutic Immunology & Infectious Disease (CITIID), Jeffrey Cheah Biomedical Centre, Department of Medicine, University of Cambridge, Cambridge, United Kingdom.
PLoS Biol. 2023 Nov 28;21(11):e3002398. doi: 10.1371/journal.pbio.3002398. eCollection 2023 Nov.
The prenylated form of the human 2'-5'-oligoadenylate synthetase 1 (OAS1) protein has been shown to potently inhibit the replication of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), the virus responsible for the Coronavirus Disease 2019 (COVID-19) pandemic. However, the OAS1 orthologue in the horseshoe bats (superfamily Rhinolophoidea), the reservoir host of SARS-related coronaviruses (SARSr-CoVs), has lost the prenylation signal required for this antiviral activity. Herein, we used an ancestral state reconstruction approach to predict and reconstitute in vitro, the most likely OAS1 protein sequence expressed by the Rhinolophoidea common ancestor prior to its prenylation loss (RhinoCA OAS1). We exogenously expressed the ancient bat protein in vitro to show that, unlike its non-prenylated horseshoe bat descendants, RhinoCA OAS1 successfully blocks SARS-CoV-2 replication. Using protein structure predictions in combination with evolutionary hypothesis testing methods, we highlight sites under unique diversifying selection specific to OAS1's evolution in the Rhinolophoidea. These sites are located near the RNA-binding region and the C-terminal end of the protein where the prenylation signal would have been. Our results confirm that OAS1 prenylation loss at the base of the Rhinolophoidea clade ablated the ability of OAS1 to restrict SARSr-CoV replication and that subsequent evolution of the gene in these bats likely favoured an alternative function. These findings can advance our understanding of the tightly linked association between SARSr-CoVs and horseshoe bats.
人 2′-5′-寡聚腺苷酸合成酶 1(OAS1)蛋白的异戊烯化形式已被证明能有效抑制严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)的复制,SARS-CoV-2 是导致 2019 年冠状病毒病(COVID-19)大流行的病毒。然而,SARS 相关冠状病毒(SARSr-CoVs)的宿主马蹄蝠(长鼻目)中的 OAS1 同源物失去了发挥这种抗病毒活性所需的异戊烯化信号。在此,我们使用祖先状态重建方法预测并在体外重建长鼻目共同祖先表达的最可能的 OAS1 蛋白序列,该祖先在失去异戊烯化之前(RhinoCA OAS1)。我们体外表达了古老的蝙蝠蛋白,结果表明,与未异戊烯化的马蹄蝠后代不同,RhinoCA OAS1 成功阻止了 SARS-CoV-2 的复制。我们使用蛋白质结构预测结合进化假说检验方法,突出了 OAS1 在长鼻目进化过程中受到独特多样化选择的位点。这些位点位于 RNA 结合区域和蛋白质的 C 末端附近,异戊烯化信号本来就在那里。我们的研究结果证实,长鼻目进化分支基部的 OAS1 异戊烯化丢失削弱了 OAS1 限制 SARSr-CoV 复制的能力,而该基因在这些蝙蝠中的后续进化可能更有利于替代功能。这些发现可以增进我们对 SARSr-CoVs 与马蹄蝠之间紧密联系的理解。